Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   EQH20_RS02530 Genome accession   NZ_CP035260
Coordinates   510557..510823 (+) Length   88 a.a.
NCBI ID   WP_001819358.1    Uniprot ID   Q8DQT3
Organism   Streptococcus pneumoniae strain TVO_1901925     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 505557..515823
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH20_RS02510 (EQH20_02675) - 505768..506277 (+) 510 WP_000619941.1 N-acetyltransferase -
  EQH20_RS02515 (EQH20_02680) pheT 506354..508759 (+) 2406 WP_061647478.1 phenylalanine--tRNA ligase subunit beta -
  EQH20_RS02520 (EQH20_02685) - 508827..509828 (-) 1002 WP_000597978.1 endonuclease/exonuclease/phosphatase family protein -
  EQH20_RS02525 (EQH20_02690) - 509984..510431 (+) 448 Protein_502 IS30 family transposase -
  EQH20_RS02530 (EQH20_02695) HI0659 510557..510823 (+) 267 WP_001819358.1 helix-turn-helix domain-containing protein Machinery gene
  EQH20_RS02535 (EQH20_02700) metE 511084..513333 (+) 2250 WP_000108186.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  EQH20_RS02540 (EQH20_02705) metF 513397..514263 (+) 867 WP_000089979.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9667.20 Da        Isoelectric Point: 4.6537

>NTDB_id=297418 EQH20_RS02530 WP_001819358.1 510557..510823(+) (HI0659) [Streptococcus pneumoniae strain TVO_1901925]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VRLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=297418 EQH20_RS02530 WP_001819358.1 510557..510823(+) (HI0659) [Streptococcus pneumoniae strain TVO_1901925]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAGTC
GTCCGACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DQT3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

58.442

87.5

0.511

Multiple sequence alignment