Detailed information NTG0297280

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EQH21_RS00350
• Genome accession: NZ_CP035259
• Coordinates: 56970..57863 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343888.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901926
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 51970..62863

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH21_RS00315 (EQH21_00320)	-	52286..53455 (+)	1170	WP_000366376.1	pyridoxal phosphate-dependent aminotransferase	-
EQH21_RS00320 (EQH21_00325)	recO	53452..54222 (+)	771	WP_000616164.1	DNA repair protein RecO	Machinery gene
EQH21_RS00325 (EQH21_00330)	plsX	54219..55211 (+)	993	WP_000717464.1	phosphate acyltransferase PlsX	-
EQH21_RS00330 (EQH21_00335)	-	55217..55450 (+)	234	WP_000136447.1	acyl carrier protein	-
EQH21_RS00335 (EQH21_00340)	-	55487..55786 (+)	300	Protein_60	transposase family protein	-
EQH21_RS00340 (EQH21_00345)	blpU	55989..56219 (+)	231	Protein_61	bacteriocin-like peptide BlpU	-
EQH21_RS10595	-	56222..56347 (+)	126	WP_001840490.1	PncF family bacteriocin immunity protein	-
EQH21_RS00345 (EQH21_00350)	-	56755..56949 (+)	195	WP_000756776.1	hypothetical protein	-
EQH21_RS00350 (EQH21_00355)	comR	56970..57863 (+)	894	WP_000343888.1	XRE family transcriptional regulator	Regulator
EQH21_RS00355 (EQH21_00360)	-	58406..58702 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
EQH21_RS00360 (EQH21_00365)	-	58709..59845 (+)	1137	WP_000698828.1	hypothetical protein	-
EQH21_RS00365 (EQH21_00370)	-	59842..60324 (+)	483	WP_001232094.1	stage II sporulation protein M	-
EQH21_RS00370 (EQH21_00375)	-	60321..60917 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
EQH21_RS00375 (EQH21_00380)	-	60898..61389 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34517.01 Da
• Isoelectric Point: 4.6498

>NTDB_id=297280 EQH21_RS00350 WP_000343888.1 56970..57863(+) (comR) [Streptococcus pneumoniae strain TVO_1901926]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKASLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=297280 EQH21_RS00350 WP_000343888.1 56970..57863(+) (comR) [Streptococcus pneumoniae strain TVO_1901926]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGCTAGCCTAGTTCAAATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	36.667	100	0.37