Detailed information NTG0297159

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EQH22_RS00350
• Genome accession: NZ_CP035258
• Coordinates: 56926..57819 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343888.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901927
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 51926..62819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH22_RS00315 (EQH22_00320)	-	52241..53410 (+)	1170	WP_000366376.1	pyridoxal phosphate-dependent aminotransferase	-
EQH22_RS00320 (EQH22_00325)	recO	53407..54177 (+)	771	WP_000616164.1	DNA repair protein RecO	Machinery gene
EQH22_RS00325 (EQH22_00330)	plsX	54174..55166 (+)	993	WP_000717464.1	phosphate acyltransferase PlsX	-
EQH22_RS00330 (EQH22_00335)	-	55172..55405 (+)	234	WP_000136447.1	acyl carrier protein	-
EQH22_RS00335 (EQH22_00340)	-	55442..55741 (+)	300	Protein_60	transposase family protein	-
EQH22_RS00340 (EQH22_00345)	blpU	55944..56174 (+)	231	Protein_61	bacteriocin-like peptide BlpU	-
EQH22_RS10855	-	56177..56302 (+)	126	WP_001840490.1	PncF family bacteriocin immunity protein	-
EQH22_RS00345 (EQH22_00350)	-	56711..56905 (+)	195	WP_000756776.1	hypothetical protein	-
EQH22_RS00350 (EQH22_00355)	comR	56926..57819 (+)	894	WP_000343888.1	XRE family transcriptional regulator	Regulator
EQH22_RS00355 (EQH22_00360)	-	58362..58658 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
EQH22_RS00360 (EQH22_00365)	-	58665..59801 (+)	1137	WP_000698828.1	hypothetical protein	-
EQH22_RS00365 (EQH22_00370)	-	59798..60280 (+)	483	WP_001232094.1	stage II sporulation protein M	-
EQH22_RS00370 (EQH22_00375)	-	60277..60873 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
EQH22_RS00375 (EQH22_00380)	-	60854..61345 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34517.01 Da
• Isoelectric Point: 4.6498

>NTDB_id=297159 EQH22_RS00350 WP_000343888.1 56926..57819(+) (comR) [Streptococcus pneumoniae strain TVO_1901927]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKASLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=297159 EQH22_RS00350 WP_000343888.1 56926..57819(+) (comR) [Streptococcus pneumoniae strain TVO_1901927]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGCTAGCCTAGTTCAAATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	36.667	100	0.37