Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   EQH24_RS09265 Genome accession   NZ_CP035256
Coordinates   1810167..1810877 (+) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain TVO_1901930     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1805167..1815877
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH24_RS09250 (EQH24_09725) - 1805708..1805956 (-) 249 WP_000364990.1 YneF family protein -
  EQH24_RS09255 (EQH24_09730) treC 1806212..1807837 (-) 1626 WP_000171222.1 alpha,alpha-phosphotrehalase -
  EQH24_RS09260 (EQH24_09740) treP 1808015..1809982 (-) 1968 WP_000514332.1 PTS system trehalose-specific EIIBC component -
  EQH24_RS09265 (EQH24_09745) treR 1810167..1810877 (+) 711 WP_000760673.1 trehalose operon repressor Regulator
  EQH24_RS09270 (EQH24_09755) - 1811032..1812358 (+) 1327 Protein_1864 ISL3 family transposase -
  EQH24_RS09275 (EQH24_09760) - 1812433..1813359 (-) 927 WP_001291294.1 ATP-binding cassette domain-containing protein -
  EQH24_RS09280 (EQH24_09765) amiE 1813370..1814437 (-) 1068 WP_000159562.1 ABC transporter ATP-binding protein Regulator
  EQH24_RS09285 (EQH24_09770) amiD 1814446..1815372 (-) 927 WP_000103700.1 oligopeptide ABC transporter permease OppC Regulator

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=296986 EQH24_RS09265 WP_000760673.1 1810167..1810877(+) (treR) [Streptococcus pneumoniae strain TVO_1901930]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=296986 EQH24_RS09265 WP_000760673.1 1810167..1810877(+) (treR) [Streptococcus pneumoniae strain TVO_1901930]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACAGACTATCTGGATATGGAACTAATTCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593