Detailed information NTG0029682

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: SUB_RS05675
• Genome accession: NC_012004
• Coordinates: 1102493..1104724 (-)
• Length: 743 a.a.
• NCBI ID: WP_012658616.1
• Uniprot ID: B9DUP3
• Organism: Streptococcus uberis 0140J
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1097493..1109724

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SUB_RS05645 (SUB1123)	-	1098112..1098933 (-)	822	WP_012658610.1	ZIP family metal transporter	-
SUB_RS05650 (SUB1124)	-	1098946..1099734 (-)	789	WP_012658611.1	Nif3-like dinuclear metal center hexameric protein	-
SUB_RS05655 (SUB1125)	-	1099724..1100410 (-)	687	WP_012658612.1	tRNA (adenine(22)-N(1))-methyltransferase	-
SUB_RS05660 (SUB1126)	nth	1100477..1101133 (-)	657	WP_012658613.1	endonuclease III	-
SUB_RS05665 (SUB1127)	-	1101133..1101813 (-)	681	WP_012658614.1	DnaD domain-containing protein	-
SUB_RS05670 (SUB1128)	-	1101870..1102388 (-)	519	WP_012658615.1	adenine phosphoribosyltransferase	-
SUB_RS05675 (SUB1129)	recJ	1102493..1104724 (-)	2232	WP_012658616.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
SUB_RS05680 (SUB1130)	-	1104721..1105485 (-)	765	WP_012658617.1	SDR family NAD(P)-dependent oxidoreductase	-
SUB_RS05685 (SUB1131)	rnz	1105485..1106414 (-)	930	WP_012658618.1	ribonuclease Z	-
SUB_RS05690 (SUB1132)	-	1106433..1107065 (-)	633	WP_012658619.1	cystathionine beta-lyase	-
SUB_RS05695 (SUB1133)	hflX	1107058..1108296 (-)	1239	WP_012658620.1	GTPase HflX	-
SUB_RS05700 (SUB1134)	miaA	1108369..1109274 (-)	906	WP_012658621.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
SUB_RS09455 (SUB1135)	-	1109407..1109583 (+)	177	WP_012658622.1	DUF3042 family protein	-

Sequence

Protein

• Length: 743 a.a.
• Molecular weight: 83588.65 Da
• Isoelectric Point: 4.6695

>NTDB_id=29682 SUB_RS05675 WP_012658616.1 1102493..1104724(-) (recJ) [Streptococcus uberis 0140J]
MIEAKYDWKIEQEKPDDGFFKLAKKNGLTELSAQILFERGISSQEAMDHFLRADLADLHDPFLLNDMEKAVNRIRQAIEN
YEQILIYGDYDADGMTSASIMKETLEMLGAEVLVYLPNRFTDGYGPNLSVYKYFMNQEKVSLILTVDNGVSGHEGISYAQ
ANGVDVIVTDHHSLPNQLPEAFAIIHPEHPNADYPFKKLAGCGVAFKLATALLDGVPTELLDLVAIGTIADMVSLTDENR
ILVKNGLHVLKSSERVGLQELMALSQVDFDHFDEEVVGFKLAPQLNALGRLDDPNPAIELLTGFDEEEAQGIARMINGKN
EERKALVQTIFEEAIAMVDTQKPVQVLAKEGWHPGVLGIVAGRIMEETSQTVLVLAIENGFAKGSARSIEAINIFKALNH
SKDLLTAFGGHEGAAGMTLPVENIPLLSEALCHYVTENEIDWTVKNSLKIDHELQLEEISLETIKNLNLLAPFGMDHPQP
IFLMKDFQVIQARTLGADNKHLKFRIRKGSSEVDVLAFNQGHLLQEFQQSQGLELAVTLSVNVWNGSTSLQLMLIDARVM
GIQLYDIRAKKYDIPNHLPSVFDSNDSKEAVLDYIPEETHRLFEAFKDREFTAIYFKNLIDKPYYLSGYGTKDQFTRLYK
TIYQFPEFDVRYKLTELSNYLKIDKILLIKMIQIFEELEFVTIIDGVMTVNKGASKKAIANSQIYQNLKELVKIQEIMAL
ATPQEIYQFLKENSKAKENEVDS

Nucleotide

• Length: 2232 bp

>NTDB_id=29682 SUB_RS05675 WP_012658616.1 1102493..1104724(-) (recJ) [Streptococcus uberis 0140J]
ATGATAGAAGCCAAATATGATTGGAAAATAGAGCAAGAGAAGCCAGATGATGGCTTCTTTAAGCTTGCCAAAAAAAATGG
ACTAACTGAACTGTCTGCGCAAATTCTTTTTGAGAGAGGTATTAGTAGTCAAGAAGCTATGGACCATTTCTTAAGAGCGG
ATTTAGCTGATTTACATGATCCTTTTCTGCTCAATGACATGGAAAAAGCCGTTAATAGGATTCGTCAAGCTATTGAAAAC
TATGAACAGATTTTGATTTATGGTGATTATGATGCTGATGGTATGACATCAGCCTCTATTATGAAAGAAACCCTTGAAAT
GTTAGGGGCAGAAGTCTTAGTCTATCTCCCAAATCGATTCACTGATGGCTATGGTCCTAATCTGAGTGTTTATAAATATT
TTATGAATCAAGAGAAGGTTTCCTTGATTCTGACAGTTGACAATGGTGTTTCTGGGCATGAGGGTATTTCTTATGCGCAA
GCCAATGGGGTTGATGTGATTGTGACCGATCACCATAGTCTTCCTAATCAACTACCAGAAGCTTTTGCCATTATCCACCC
AGAGCATCCAAATGCAGATTACCCTTTTAAAAAGTTAGCGGGTTGTGGCGTTGCTTTTAAATTAGCTACGGCTTTGCTTG
ATGGTGTTCCTACCGAATTATTGGATTTAGTCGCCATTGGCACCATTGCTGATATGGTCAGTTTGACAGATGAAAATCGG
ATTTTAGTCAAAAATGGGCTTCATGTTTTGAAATCAAGTGAGCGAGTGGGCCTTCAAGAGTTAATGGCTTTATCACAAGT
GGACTTTGACCATTTTGATGAAGAAGTGGTTGGTTTTAAATTAGCCCCTCAACTAAATGCTTTAGGACGATTGGATGATC
CAAATCCAGCTATTGAACTGTTAACGGGTTTTGATGAGGAAGAGGCGCAAGGCATAGCCAGGATGATAAATGGTAAGAAT
GAAGAGCGGAAAGCTCTGGTTCAAACCATTTTTGAGGAAGCTATCGCCATGGTGGACACACAGAAACCTGTTCAAGTCTT
GGCTAAAGAAGGTTGGCATCCTGGAGTATTGGGGATTGTTGCTGGCCGCATCATGGAGGAAACGAGTCAAACAGTACTAG
TTTTAGCTATCGAGAATGGTTTCGCCAAGGGTTCGGCACGCAGTATTGAAGCTATTAATATTTTTAAGGCTTTAAATCAT
AGTAAGGACTTATTAACAGCTTTCGGTGGGCATGAAGGTGCAGCCGGAATGACCTTACCCGTTGAAAATATTCCCTTATT
ATCTGAGGCCCTTTGTCATTATGTGACTGAGAATGAAATAGATTGGACCGTTAAAAATAGTCTCAAGATTGATCATGAAC
TTCAGTTAGAAGAGATAAGCCTTGAAACCATTAAAAACCTCAATCTTTTGGCACCGTTTGGTATGGATCATCCTCAGCCT
ATTTTTCTGATGAAAGATTTTCAGGTCATTCAAGCTAGGACCCTAGGCGCTGATAATAAACACTTGAAATTTAGAATAAG
AAAGGGTTCCTCAGAGGTAGATGTTTTGGCCTTTAACCAAGGTCATCTCTTGCAAGAATTCCAACAAAGTCAAGGACTAG
AATTAGCAGTTACCCTTTCTGTCAATGTCTGGAATGGAAGCACTAGTCTGCAATTAATGCTGATTGATGCGCGTGTGATG
GGAATTCAATTATATGATATTAGGGCAAAGAAATATGACATTCCAAATCACCTACCTTCCGTATTTGACAGTAATGACAG
TAAAGAAGCTGTTTTGGATTATATACCAGAGGAGACGCACCGTCTATTTGAAGCTTTTAAGGATCGCGAATTCACAGCTA
TCTATTTCAAAAATCTCATCGATAAGCCCTATTACCTAAGTGGTTATGGGACAAAGGATCAATTTACCAGACTTTATAAA
ACCATTTACCAATTTCCAGAATTTGATGTCCGTTATAAACTAACTGAACTGAGCAACTATTTGAAAATTGATAAAATATT
ACTAATCAAAATGATTCAAATATTTGAAGAACTGGAATTTGTTACCATTATAGATGGAGTTATGACTGTCAATAAAGGGG
CAAGCAAAAAAGCAATAGCAAACAGTCAAATCTATCAAAATCTAAAAGAATTGGTTAAAATTCAAGAAATAATGGCCTTA
GCAACACCACAAGAAATCTATCAATTTCTCAAGGAAAATAGCAAAGCTAAGGAGAATGAAGTAGACAGTTGA

Domains

Predicted by InterProScan.

• DHHA1 domain (DHHA1) (319-433)

• DHH family (DHH) (83-228)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (583-730)

• RecJ OB domain (RecJ_OB) (450-556)

3D structure

• AlphaFold DB: B9DUP3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	63.158	99.731	0.63
recJ	Bacillus subtilis subsp. subtilis str. 168	38.089	100	0.402