Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NMCC_RS07305 Genome accession   NC_010120
Coordinates   1411560..1412021 (+) Length   153 a.a.
NCBI ID   WP_014581408.1    Uniprot ID   -
Organism   Neisseria meningitidis 053442     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1406560..1417021
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMCC_RS07280 - 1407509..1407703 (-) 195 WP_033915387.1 2-hydroxymuconate tautomerase family protein -
  NMCC_RS07285 (NMCC_1387) - 1408249..1409055 (+) 807 WP_002216878.1 DUF4198 domain-containing protein -
  NMCC_RS07290 (NMCC_1388) - 1409113..1410378 (-) 1266 WP_002219042.1 Glu/Leu/Phe/Val family dehydrogenase -
  NMCC_RS07300 (NMCC_1390) - 1410785..1411492 (+) 708 WP_012221830.1 phosphoglycolate phosphatase -
  NMCC_RS07305 (NMCC_1391) recX 1411560..1412021 (+) 462 WP_014581408.1 recombination regulator RecX Regulator
  NMCC_RS14770 (NMCC_1392) - 1412095..1412256 (+) 162 WP_002232730.1 hypothetical protein -
  NMCC_RS07320 (NMCC_1393) - 1412409..1412891 (+) 483 WP_002234057.1 acyl-CoA thioesterase -
  NMCC_RS07325 (NMCC_1394) - 1413098..1414345 (-) 1248 WP_002219040.1 M23 family metallopeptidase -
  NMCC_RS07330 (NMCC_1395) surE 1414601..1415347 (-) 747 WP_012221833.1 5'/3'-nucleotidase SurE -
  NMCC_RS07335 (NMCC_1396) - 1415364..1416920 (-) 1557 WP_002223591.1 TerC family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17663.04 Da        Isoelectric Point: 9.7352

>NTDB_id=29661 NMCC_RS07305 WP_014581408.1 1411560..1412021(+) (recX) [Neisseria meningitidis 053442]
MKPQKSLRARAMDILSRQELSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSCNLLPDRSSEKLAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=29661 NMCC_RS07305 WP_014581408.1 1411560..1412021(+) (recX) [Neisseria meningitidis 053442]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAACTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCTGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACTGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

96.078

100

0.961

Multiple sequence alignment