Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   EQH32_RS02810 Genome accession   NZ_CP035248
Coordinates   547444..547710 (+) Length   88 a.a.
NCBI ID   WP_001818764.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain TVO_1901939     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 542444..552710
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH32_RS02790 (EQH32_02950) - 542551..543060 (+) 510 WP_000619941.1 N-acetyltransferase -
  EQH32_RS02795 (EQH32_02955) pheT 543137..545542 (+) 2406 WP_000961597.1 phenylalanine--tRNA ligase subunit beta -
  EQH32_RS02800 (EQH32_02960) - 545715..546716 (-) 1002 WP_000597994.1 endonuclease/exonuclease/phosphatase family protein -
  EQH32_RS02805 (EQH32_02965) - 546872..547360 (+) 489 Protein_558 transposase -
  EQH32_RS02810 (EQH32_02970) HI0659 547444..547710 (+) 267 WP_001818764.1 helix-turn-helix domain-containing protein Machinery gene
  EQH32_RS02815 (EQH32_02975) metE 547971..550220 (+) 2250 WP_000108203.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  EQH32_RS02820 (EQH32_02980) metF 550284..551150 (+) 867 WP_000089976.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9627.08 Da        Isoelectric Point: 4.2720

>NTDB_id=296323 EQH32_RS02810 WP_001818764.1 547444..547710(+) (HI0659) [Streptococcus pneumoniae strain TVO_1901939]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGVSQPVIARMETGESSLQLDTVLKVLTSLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=296323 EQH32_RS02810 WP_001818764.1 547444..547710(+) (HI0659) [Streptococcus pneumoniae strain TVO_1901939]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAGTGAGTCAACCTGTCATAGCTA
GGATGGAAACAGGAGAGAGCAGTCTTCAGTTGGATACGGTCTTAAAAGTTCTAACCAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

57.143

87.5

0.5