Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C9I47_RS13530 Genome accession   NZ_CP029843
Coordinates   3042182..3042595 (-) Length   137 a.a.
NCBI ID   WP_111267216.1    Uniprot ID   A0A508B6A6
Organism   Marilutibacter maris strain HZ9B     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3037182..3047595
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9I47_RS13515 (C9I47_2485) - 3039146..3041155 (-) 2010 WP_223250140.1 methyl-accepting chemotaxis protein -
  C9I47_RS13520 (C9I47_2486) - 3041230..3041778 (-) 549 Protein_2710 chemotaxis protein CheW -
  C9I47_RS13525 (C9I47_2487) - 3041798..3042163 (-) 366 WP_111267215.1 PleD family two-component system response regulator -
  C9I47_RS13530 (C9I47_2488) pilG 3042182..3042595 (-) 414 WP_111267216.1 response regulator Regulator
  C9I47_RS13535 (C9I47_2489) gshB 3042883..3043845 (+) 963 WP_111267217.1 glutathione synthase -
  C9I47_RS13540 (C9I47_2490) - 3043929..3044801 (+) 873 WP_111267218.1 energy transducer TonB -
  C9I47_RS13545 (C9I47_2491) tsaB 3045023..3045730 (-) 708 WP_111267219.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  C9I47_RS13550 (C9I47_2492) - 3045727..3046143 (-) 417 WP_111267220.1 VOC family protein -

Sequence

Protein


Download         Length: 137 a.a.        Molecular weight: 15263.60 Da        Isoelectric Point: 6.8634

>NTDB_id=296282 C9I47_RS13530 WP_111267216.1 3042182..3042595(-) (pilG) [Marilutibacter maris strain HZ9B]
MFDEGRTGSLDGLRVMVIDDSKTIRRTAETLLKREGCDVVTAIDGFEALAKIADQQPHIIFVDIMMPRLDGYQTCALIKS
NQLFKGTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTHVHTEAHNA

Nucleotide


Download         Length: 414 bp        

>NTDB_id=296282 C9I47_RS13530 WP_111267216.1 3042182..3042595(-) (pilG) [Marilutibacter maris strain HZ9B]
ATGTTTGACGAGGGCCGTACCGGCAGTCTCGATGGTTTGAGGGTCATGGTGATCGACGACTCCAAGACCATCAGACGCAC
CGCAGAGACGTTGCTGAAACGTGAGGGCTGTGACGTGGTCACCGCCATCGATGGATTCGAAGCACTGGCGAAGATCGCCG
ACCAGCAGCCGCATATCATCTTCGTGGATATCATGATGCCGCGACTGGATGGGTATCAGACCTGCGCGTTGATCAAGAGC
AACCAGCTGTTCAAGGGCACCCCCGTGATCATGCTGTCATCCAAGGACGGGTTGTTCGACAAGGCGCGCGGCAGGATCGT
CGGTTCCGAGCAGTACCTGACCAAGCCATTCACGCGCGAGGAGCTGCTCGGCGCGATCCGCACACACGTTCACACAGAAG
CACACAACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A508B6A6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72.581

90.511

0.657

Multiple sequence alignment