Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DM611_RS17270 Genome accession   NZ_CP029773
Coordinates   3691582..3691983 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain SJTL3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3686582..3696983
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DM611_RS17255 (DM611_17255) - 3688593..3690629 (-) 2037 WP_032130100.1 methyl-accepting chemotaxis protein -
  DM611_RS17260 (DM611_17260) - 3690671..3691201 (-) 531 WP_110713261.1 chemotaxis protein CheW -
  DM611_RS17265 (DM611_17265) - 3691201..3691563 (-) 363 WP_005410717.1 response regulator -
  DM611_RS17270 (DM611_17270) pilG 3691582..3691983 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  DM611_RS17275 (DM611_17275) gshB 3692224..3693171 (+) 948 WP_012511876.1 glutathione synthase -
  DM611_RS17280 (DM611_17280) - 3693171..3694055 (+) 885 WP_110713262.1 energy transducer TonB -
  DM611_RS17285 (DM611_17285) tsaB 3694544..3695257 (-) 714 WP_110713264.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=296013 DM611_RS17270 WP_005418455.1 3691582..3691983(-) (pilG) [Stenotrophomonas maltophilia strain SJTL3]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=296013 DM611_RS17270 WP_005418455.1 3691582..3691983(-) (pilG) [Stenotrophomonas maltophilia strain SJTL3]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCCAAGATCG
CAGACCAGCAACCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTGTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment