Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CFC57_RS07935 | Genome accession | NZ_CP029751 |
| Coordinates | 1601223..1601522 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain Smith | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1596223..1606522
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFC57_RS07910 (CFC57_08265) | gcvPA | 1597435..1598781 (-) | 1347 | WP_000019680.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| CFC57_RS07915 (CFC57_08270) | gcvT | 1598801..1599892 (-) | 1092 | WP_000093356.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CFC57_RS07920 (CFC57_08275) | - | 1600051..1600575 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| CFC57_RS07925 (CFC57_08280) | - | 1600565..1600711 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| CFC57_RS07930 (CFC57_08285) | comGF | 1600808..1601305 (-) | 498 | WP_029656266.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CFC57_RS07935 (CFC57_08290) | comGE | 1601223..1601522 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| CFC57_RS07940 (CFC57_08295) | comGD | 1601509..1601955 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CFC57_RS07945 (CFC57_08300) | comGC | 1601933..1602244 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CFC57_RS07950 (CFC57_08305) | comGB | 1602258..1603330 (-) | 1073 | Protein_1529 | competence type IV pilus assembly protein ComGB | - |
| CFC57_RS07955 (CFC57_08310) | comGA | 1603302..1604276 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CFC57_RS07960 (CFC57_08315) | - | 1604328..1604951 (-) | 624 | WP_001223011.1 | MBL fold metallo-hydrolase | - |
| CFC57_RS07965 (CFC57_08320) | - | 1604948..1605277 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CFC57_RS07970 (CFC57_08325) | - | 1605277..1606263 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| CFC57_RS07975 (CFC57_08330) | - | 1606260..1606463 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=295884 CFC57_RS07935 WP_000844413.1 1601223..1601522(-) (comGE) [Staphylococcus aureus strain Smith]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=295884 CFC57_RS07935 WP_000844413.1 1601223..1601522(-) (comGE) [Staphylococcus aureus strain Smith]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCTAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACTACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCTAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACTACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |