Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   EQH41_RS02705 Genome accession   NZ_CP035239
Coordinates   553831..554097 (+) Length   88 a.a.
NCBI ID   WP_001808618.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain TVO_TIGR4     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 548831..559097
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH41_RS02685 (EQH41_02915) - 549074..549583 (+) 510 WP_000619950.1 N-acetyltransferase -
  EQH41_RS02690 (EQH41_02920) pheT 549660..552065 (+) 2406 WP_000961511.1 phenylalanine--tRNA ligase subunit beta -
  EQH41_RS02695 (EQH41_02925) - 552133..553134 (-) 1002 WP_000597970.1 endonuclease/exonuclease/phosphatase family protein -
  EQH41_RS02700 (EQH41_02930) - 553290..553705 (+) 416 Protein_542 helix-turn-helix domain-containing protein -
  EQH41_RS02705 (EQH41_02935) HI0659 553831..554097 (+) 267 WP_001808618.1 helix-turn-helix domain-containing protein Machinery gene
  EQH41_RS02710 (EQH41_02940) metE 554358..556607 (+) 2250 WP_000108201.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  EQH41_RS02715 (EQH41_02945) metF 556671..557537 (+) 867 WP_000089968.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9622.15 Da        Isoelectric Point: 4.4893

>NTDB_id=295370 EQH41_RS02705 WP_001808618.1 553831..554097(+) (HI0659) [Streptococcus pneumoniae strain TVO_TIGR4]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAI
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=295370 EQH41_RS02705 WP_001808618.1 553831..554097(+) (HI0659) [Streptococcus pneumoniae strain TVO_TIGR4]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAATC
GTCCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.039

87.5

0.534