Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   CSB78_RS11380 Genome accession   NZ_CP029671
Coordinates   2222172..2223215 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain AR_0222     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2217172..2228215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSB78_RS11340 - 2217598..2217708 (+) 111 WP_001790257.1 hypothetical protein -
  CSB78_RS11345 (CSB78_2039) - 2217737..2218150 (+) 414 WP_001557448.1 hypothetical protein -
  CSB78_RS11355 (CSB78_2040) - 2218581..2219567 (-) 987 WP_000999717.1 aromatic acid exporter family protein -
  CSB78_RS11365 (CSB78_2041) map 2220098..2220856 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  CSB78_RS11370 (CSB78_2042) - 2221073..2221459 (+) 387 WP_001110179.1 hypothetical protein -
  CSB78_RS11375 (CSB78_2043) liaF 2221474..2222175 (+) 702 WP_110411511.1 cell wall-active antibiotics response protein LiaF -
  CSB78_RS11380 (CSB78_2044) vraS 2222172..2223215 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  CSB78_RS11385 (CSB78_2045) vraR 2223205..2223834 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  CSB78_RS11390 (CSB78_2046) - 2223947..2225164 (-) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  CSB78_RS11395 (CSB78_2047) - 2225442..2225717 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  CSB78_RS11400 (CSB78_2048) - 2225724..2226188 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  CSB78_RS11405 (CSB78_2049) - 2226335..2226535 (+) 201 WP_000180460.1 DUF1128 family protein -
  CSB78_RS11410 (CSB78_2050) - 2226538..2227794 (+) 1257 WP_001795108.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=294970 CSB78_RS11380 WP_001017131.1 2222172..2223215(+) (vraS) [Staphylococcus aureus strain AR_0222]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=294970 CSB78_RS11380 WP_001017131.1 2222172..2223215(+) (vraS) [Staphylococcus aureus strain AR_0222]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment