Detailed information NTG0029493

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: DACI_RS08955
• Genome accession: NC_010002
• Coordinates: 1997093..1998313 (-)
• Length: 406 a.a.
• NCBI ID: WP_012203726.1
• Uniprot ID: A9BUX9
• Organism: Delftia acidovorans SPH-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1992093..2003313

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DACI_RS08930 (Daci_1794)	-	1993000..1993557 (+)	558	WP_043781007.1	MarR family winged helix-turn-helix transcriptional regulator	-
DACI_RS08935 (Daci_1795)	-	1993550..1994383 (+)	834	WP_012203722.1	class II aldolase/adducin family protein	-
DACI_RS08940 (Daci_1796)	-	1994402..1995427 (+)	1026	WP_012203723.1	2-dehydropantoate 2-reductase	-
DACI_RS08945 (Daci_1797)	cutA	1995480..1995878 (+)	399	WP_012203724.1	divalent-cation tolerance protein CutA	-
DACI_RS08950 (Daci_1798)	-	1995865..1996854 (-)	990	WP_012203725.1	tripartite tricarboxylate transporter substrate binding protein	-
DACI_RS08955 (Daci_1799)	pilA	1997093..1998313 (-)	1221	WP_012203726.1	signal recognition particle-docking protein FtsY	Machinery gene
DACI_RS08960 (Daci_1800)	-	1998342..1999820 (+)	1479	WP_012203727.1	pitrilysin family protein	-
DACI_RS08965 (Daci_1801)	-	1999847..2001208 (+)	1362	WP_012203728.1	pitrilysin family protein	-
DACI_RS08970 (Daci_1802)	rsmD	2001205..2001915 (+)	711	WP_012203729.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
DACI_RS08975 (Daci_1803)	coaD	2002047..2002547 (+)	501	WP_013803934.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42426.35 Da
• Isoelectric Point: 5.7832

>NTDB_id=29493 DACI_RS08955 WP_012203726.1 1997093..1998313(-) (pilA) [Delftia acidovorans SPH-1]
MFSFFKKKPTPSAAEISPADSSAAPEKAGIPATPPQDSPPALPPAAPAAPAADTGSAWWRKPFGGGKGDAAPPETPPAPA
AAPASTIAPADFIAAPEPTAKPEAEGASRQNWMQRLKTGLRKTGSSIATVFTGTQINDALYEELEDALLMADTGVKATEH
LLADLRRRVKEAKATDPAAVKALLADALADLLRPLEKPLVIGEHQPTVIMVAGVNGAGKTTSIGKLTRHLADEGQSVLLA
AADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVSKAD
ATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREF
AQALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=29493 DACI_RS08955 WP_012203726.1 1997093..1998313(-) (pilA) [Delftia acidovorans SPH-1]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCGCCGCCGAGATTTCCCCGGCGGACAGCAGCGCCGCGCCTGAAAA
GGCCGGCATTCCCGCAACCCCACCGCAGGACAGCCCCCCCGCCCTGCCACCGGCCGCGCCAGCAGCGCCGGCCGCCGACA
CCGGCAGTGCCTGGTGGCGCAAGCCCTTTGGCGGCGGCAAGGGCGATGCCGCGCCCCCCGAGACCCCGCCTGCCCCAGCT
GCTGCACCCGCGTCCACCATCGCGCCTGCGGACTTCATTGCCGCGCCCGAGCCCACGGCCAAGCCCGAGGCCGAAGGTGC
CAGCCGCCAGAACTGGATGCAGCGCCTCAAGACCGGCCTGCGCAAGACCGGCAGCAGCATTGCCACGGTCTTCACGGGCA
CGCAGATCAACGATGCGCTGTACGAGGAACTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCAC
CTGCTCGCCGACCTGCGCCGCCGCGTCAAGGAGGCCAAGGCCACCGACCCCGCCGCCGTCAAGGCGCTGCTGGCCGATGC
CCTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGGTCATCGGCGAGCACCAGCCCACCGTGATCATGGTGGCGGGCG
TCAACGGCGCGGGCAAGACCACCTCCATCGGCAAGCTCACCCGCCACCTGGCCGACGAAGGCCAGAGCGTGCTGCTGGCC
GCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTTGGCGTCTGGGCCAATCGCAACACGGTGGAGATCGTCAGCCA
GGAAGGGGGCGATCCTGCGGCCGTGAGCTTTGACGCCGTCACCGCCGGCCGCGCGCGCAAGAAGGATGTGGTGCTGGTGG
ACACGGCAGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCAGCAAGGCCGAC
GCCACGGCACCGCACGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTTGA
CGATGCACTGCAGCTCACGGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCTGCCATTGCCC
AGGAACGGCCGATCCCCGTGTACTTCATCGGCGTGGGTGAAAAGGTCGAGGACCTGGAGACCTTCAACGCCAGGGAATTT
GCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (125-188)

3D structure

• AlphaFold DB: A9BUX9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.526	100	0.515