Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   EQH46_RS02680 Genome accession   NZ_CP035234
Coordinates   533850..534116 (+) Length   88 a.a.
NCBI ID   WP_001808618.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain TVO_1902277     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 528850..539116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH46_RS02660 (EQH46_02840) - 529093..529602 (+) 510 WP_000619950.1 N-acetyltransferase -
  EQH46_RS02665 (EQH46_02845) pheT 529679..532084 (+) 2406 WP_000961511.1 phenylalanine--tRNA ligase subunit beta -
  EQH46_RS02670 (EQH46_02850) - 532152..533153 (-) 1002 WP_000597970.1 endonuclease/exonuclease/phosphatase family protein -
  EQH46_RS02675 (EQH46_02855) - 533309..533724 (+) 416 Protein_538 helix-turn-helix domain-containing protein -
  EQH46_RS02680 (EQH46_02860) HI0659 533850..534116 (+) 267 WP_001808618.1 helix-turn-helix domain-containing protein Machinery gene
  EQH46_RS02685 (EQH46_02865) metE 534377..536626 (+) 2250 WP_000108201.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  EQH46_RS02690 (EQH46_02870) metF 536690..537556 (+) 867 WP_000089968.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  EQH46_RS10955 (EQH46_02875) - 537738..538010 (-) 273 WP_000857732.1 hypothetical protein -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9622.15 Da        Isoelectric Point: 4.4893

>NTDB_id=294785 EQH46_RS02680 WP_001808618.1 533850..534116(+) (HI0659) [Streptococcus pneumoniae strain TVO_1902277]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAI
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=294785 EQH46_RS02680 WP_001808618.1 533850..534116(+) (HI0659) [Streptococcus pneumoniae strain TVO_1902277]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAATC
GTCCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.039

87.5

0.534

Multiple sequence alignment