Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EQZ01_RS20915 Genome accession   NZ_CP035231
Coordinates   3993843..3994532 (-) Length   229 a.a.
NCBI ID   WP_014666014.1    Uniprot ID   A0ABU0V6D7
Organism   Bacillus subtilis strain SRCM103571     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3988843..3999532
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQZ01_RS20895 (EQZ01_20895) yxeA 3989748..3990095 (-) 348 WP_128738465.1 YxeA family protein -
  EQZ01_RS20900 (EQZ01_20900) yxdM 3990109..3991977 (-) 1869 WP_128738467.1 ABC transporter permease YxdM -
  EQZ01_RS20905 (EQZ01_20905) yxdL 3991952..3992725 (-) 774 WP_024572301.1 ABC transporter ATP-binding protein YxdL -
  EQZ01_RS20910 (EQZ01_20910) yxdK 3992869..3993846 (-) 978 WP_095252482.1 two-component system sensor histidine kinase YxdK -
  EQZ01_RS20915 (EQZ01_20915) braR 3993843..3994532 (-) 690 WP_014666014.1 two-component system response regulator YxdJ Regulator
  EQZ01_RS20920 (EQZ01_20920) iolJ 3994640..3995512 (-) 873 WP_128738469.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  EQZ01_RS20925 (EQZ01_20925) iolI 3995533..3996369 (-) 837 WP_128738471.1 2-keto-myo-inositol isomerase -
  EQZ01_RS20930 (EQZ01_20930) iolH 3996455..3997324 (-) 870 WP_086344514.1 sugar phosphate isomerase/epimerase -
  EQZ01_RS20935 (EQZ01_20935) iolG 3997344..3998378 (-) 1035 WP_014481414.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26616.34 Da        Isoelectric Point: 4.8564

>NTDB_id=294752 EQZ01_RS20915 WP_014666014.1 3993843..3994532(-) (braR) [Bacillus subtilis strain SRCM103571]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPSYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=294752 EQZ01_RS20915 WP_014666014.1 3993843..3994532(-) (braR) [Bacillus subtilis strain SRCM103571]
TTGAATAAAATTATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGTCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAACGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTGGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTCCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406