Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   EQZ01_RS19570 Genome accession   NZ_CP035231
Coordinates   3729728..3730102 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain SRCM103571     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3724728..3735102
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQZ01_RS19545 (EQZ01_19545) - 3724892..3725053 (-) 162 WP_003227632.1 hypothetical protein -
  EQZ01_RS19550 (EQZ01_19550) glpX 3725268..3726233 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  EQZ01_RS19555 (EQZ01_19555) murAB 3726264..3727553 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  EQZ01_RS19560 (EQZ01_19560) fsa 3727932..3728570 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  EQZ01_RS19565 (EQZ01_19565) fbaA 3728690..3729547 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  EQZ01_RS19570 (EQZ01_19570) letA 3729728..3730102 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  EQZ01_RS19575 (EQZ01_19575) ywjG 3730268..3730789 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  EQZ01_RS19580 (EQZ01_19580) pyrG 3730871..3732478 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  EQZ01_RS19585 (EQZ01_19585) rpoE 3732720..3733241 (-) 522 WP_014665742.1 DNA-directed RNA polymerase subunit delta -
  EQZ01_RS19590 (EQZ01_19590) acdA 3733424..3734563 (-) 1140 WP_014481201.1 acyl-CoA dehydrogenase AcdA -

Sequence


Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=294749 EQZ01_RS19570 WP_003227621.1 3729728..3730102(-) (letA) [Bacillus subtilis strain SRCM103571]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=294749 EQZ01_RS19570 WP_003227621.1 3729728..3730102(-) (letA) [Bacillus subtilis strain SRCM103571]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTCTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCCCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363

  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363


Multiple sequence alignment