Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   EQZ01_RS10125 Genome accession   NZ_CP035231
Coordinates   1960225..1960842 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain SRCM103571     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1955225..1965842
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQZ01_RS10095 (EQZ01_10095) yndJ 1955543..1957183 (+) 1641 WP_128737898.1 YndJ family protein -
  EQZ01_RS10100 (EQZ01_10100) - 1957271..1957585 (+) 315 WP_206647974.1 hypothetical protein -
  EQZ01_RS10105 (EQZ01_10105) pghL 1957810..1958568 (+) 759 WP_128737900.1 gamma-polyglutamate hydrolase PghL -
  EQZ01_RS10110 (EQZ01_10110) - 1958595..1959044 (-) 450 WP_003245454.1 YndM family protein -
  EQZ01_RS10115 (EQZ01_10115) fosB 1959253..1959687 (+) 435 WP_128737902.1 metallothiol transferase FosB -
  EQZ01_RS21850 - 1959596..1959872 (+) 277 Protein_1936 hypothetical protein -
  EQZ01_RS10125 (EQZ01_10125) dinR/lexA 1960225..1960842 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  EQZ01_RS10130 (EQZ01_10130) yneA 1960992..1961309 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  EQZ01_RS10135 (EQZ01_10135) dinL 1961328..1961981 (+) 654 WP_086343884.1 recombinase family protein -
  EQZ01_RS10140 (EQZ01_10140) ynzC 1962045..1962278 (+) 234 WP_024573193.1 DUF896 domain-containing protein -
  EQZ01_RS10145 (EQZ01_10145) recP/tkt 1962447..1964450 (+) 2004 WP_128737903.1 transketolase Machinery gene
  EQZ01_RS10150 (EQZ01_10150) sirA 1964603..1965049 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  EQZ01_RS10155 (EQZ01_10155) yneF 1965135..1965353 (+) 219 WP_003221221.1 YneF family protein -
  EQZ01_RS10160 (EQZ01_10160) ynzD 1965427..1965600 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=294686 EQZ01_RS10125 WP_003238209.1 1960225..1960842(-) (dinR/lexA) [Bacillus subtilis strain SRCM103571]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=294686 EQZ01_RS10125 WP_003238209.1 1960225..1960842(-) (dinR/lexA) [Bacillus subtilis strain SRCM103571]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGTTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACTGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACACACATTCGTTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1