Detailed information NTG0294561

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: EQY76_RS13200
• Genome accession: NZ_CP035230
• Coordinates: 2475558..2476688 (-)
• Length: 376 a.a.
• NCBI ID: WP_042976548.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103551
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2470558..2481688

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQY76_RS13180 (EQY76_13180)	-	2470722..2471402 (-)	681	WP_086352748.1	ABC transporter ATP-binding protein	-
EQY76_RS13185 (EQY76_13185)	-	2471399..2472502 (-)	1104	WP_086352747.1	ABC transporter permease	-
EQY76_RS13190 (EQY76_13190)	-	2472602..2473981 (-)	1380	WP_086352746.1	HAMP domain-containing sensor histidine kinase	-
EQY76_RS13195 (EQY76_13195)	-	2473978..2474652 (-)	675	WP_128753612.1	response regulator transcription factor	-
EQY76_RS13200 (EQY76_13200)	rapC	2475558..2476688 (-)	1131	WP_042976548.1	hypothetical protein	Regulator
EQY76_RS21695 (EQY76_13205)	-	2476845..2476958 (+)	114	WP_225510042.1	TraX family protein	-
EQY76_RS13210 (EQY76_13210)	-	2477098..2477232 (+)	135	WP_069704083.1	hypothetical protein	-
EQY76_RS13215 (EQY76_13215)	-	2477420..2478271 (-)	852	WP_069704082.1	aldo/keto reductase	-
EQY76_RS13220 (EQY76_13220)	-	2478431..2478874 (+)	444	WP_069704081.1	MerR family transcriptional regulator	-
EQY76_RS21700	-	2479042..2479173 (-)	132	WP_310914360.1	hypothetical protein	-
EQY76_RS21815 (EQY76_13230)	-	2479758..2481485 (+)	1728	WP_069704080.1	T7SS effector LXG polymorphic toxin	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44157.53 Da
• Isoelectric Point: 6.6961

>NTDB_id=294561 EQY76_RS13200 WP_042976548.1 2475558..2476688(-) (rapC) [Bacillus subtilis strain SRCM103551]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEINQMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIDE
LLEKIEASNKGITGLLSYYSLFFRGMYEFDKREYVKAIGFYREAEKHLTHVNDDIEKAEFHFKLAEAYYIMKQNHISMHH
VKQAMDIYNQYELYKVRKIQCHFVISGNYVDFKHFEKSLPHLEKALELSKQLERNERLLSSAYYNLGKNYADLGINDKAD
HFLNEAAKVSESAKLSNLPHSLFTYAKFLFKQGKTSEAIKMSKKGLSAAISQGDKLFVSLQKYLEALYINAVDQAGIKKT
IDYLERNKNYAYVEDIAIDTAEVFAKSKEFETSYVYHQKMLETQKQIQRGECLYEF

Nucleotide

• Length: 1131 bp

>NTDB_id=294561 EQY76_RS13200 WP_042976548.1 2475558..2476688(-) (rapC) [Bacillus subtilis strain SRCM103551]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCTGAGGTGGAACAAGAGATCAATCAGATGGAGGAAGATGAGTATTTACTTATTTACTTCT
CTCTAATGAAATTCCGTCATCAGCTTATGTTAGATTATTTGGAACCAGTTACAACAAGAATCAGGCCAACTATTGATGAA
CTGCTTGAAAAAATAGAAGCATCCAATAAGGGGATAACTGGTCTGTTGTCTTACTACTCTCTGTTTTTTCGTGGAATGTA
TGAGTTTGATAAGAGGGAATATGTCAAAGCAATTGGTTTTTATCGAGAAGCAGAAAAACACCTTACTCATGTTAATGATG
ATATTGAGAAGGCGGAATTTCATTTTAAGTTGGCTGAAGCTTACTATATTATGAAGCAAAATCATATCTCGATGCACCAT
GTTAAACAAGCGATGGACATTTATAATCAATATGAACTTTATAAAGTGCGAAAAATACAATGTCATTTCGTGATATCTGG
AAATTACGTTGATTTTAAACATTTCGAGAAAAGCTTGCCGCACCTTGAAAAAGCCTTAGAGTTGTCCAAACAATTAGAGC
GCAATGAAAGGCTGCTTAGCTCGGCTTACTACAATCTCGGAAAGAATTACGCAGATTTAGGAATAAATGATAAAGCAGAT
CATTTCTTAAATGAGGCTGCCAAGGTATCAGAAAGTGCTAAGTTGAGCAATTTACCACATTCACTGTTTACATACGCTAA
ATTTCTTTTTAAGCAAGGGAAAACAAGTGAAGCAATAAAAATGAGTAAAAAGGGTTTATCCGCTGCAATATCCCAAGGTG
ATAAACTTTTTGTGTCCTTGCAAAAGTATTTGGAAGCACTTTATATTAATGCAGTAGATCAAGCGGGAATCAAAAAAACG
ATTGATTACTTAGAAAGAAATAAGAATTATGCGTATGTGGAAGATATCGCAATTGATACGGCTGAAGTTTTTGCAAAATC
AAAGGAATTTGAAACATCATATGTTTATCATCAAAAAATGCTTGAAACGCAAAAACAAATTCAGAGGGGAGAATGCCTGT
ATGAATTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_8) (221-251)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.681	100	0.447
rapF	Bacillus subtilis subsp. subtilis str. 168	41.842	100	0.423