Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EQY76_RS05545 Genome accession   NZ_CP035230
Coordinates   1052521..1053264 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain SRCM103551     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1047521..1058264
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQY76_RS05510 (EQY76_05510) yhaI 1047850..1048191 (+) 342 WP_009966921.1 YhaI family protein -
  EQY76_RS05515 (EQY76_05515) scoC 1048188..1048799 (-) 612 WP_029726315.1 HTH-type transcriptional regulator Hpr -
  EQY76_RS05520 (EQY76_05520) yhaH 1048977..1049333 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  EQY76_RS05525 (EQY76_05525) - 1049463..1049654 (+) 192 WP_014476318.1 hypothetical protein -
  EQY76_RS05530 (EQY76_05530) trpP 1049728..1050246 (-) 519 WP_003233236.1 tryptophan transporter TrpP -
  EQY76_RS05535 (EQY76_05535) serC 1050370..1051449 (-) 1080 WP_024571663.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  EQY76_RS05540 (EQY76_05540) hinT 1051596..1052033 (-) 438 WP_003233231.1 HIT family protein -
  EQY76_RS05545 (EQY76_05545) pptA 1052521..1053264 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  EQY76_RS05550 (EQY76_05550) ecsB 1053257..1054483 (+) 1227 WP_003245169.1 ABC transporter permease EcsB -
  EQY76_RS05555 (EQY76_05555) ecsC 1054503..1055213 (+) 711 WP_041345180.1 EcsC family protein -
  EQY76_RS05560 (EQY76_05560) sndC 1055231..1056421 (-) 1191 WP_041052746.1 N-acetyl amino acid acetylase SndC -
  EQY76_RS05565 (EQY76_05565) - 1056494..1057885 (-) 1392 WP_080481038.1 hypothetical protein -
  EQY76_RS05570 (EQY76_05570) - 1057950..1058249 (-) 300 Protein_1021 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=294493 EQY76_RS05545 WP_003233230.1 1052521..1053264(+) (pptA) [Bacillus subtilis strain SRCM103551]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=294493 EQY76_RS05545 WP_003233230.1 1052521..1053264(+) (pptA) [Bacillus subtilis strain SRCM103551]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGATTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547

Multiple sequence alignment