Detailed information NTG0294465

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: EQY76_RS01655
• Genome accession: NZ_CP035230
• Coordinates: 295212..296333 (+)
• Length: 373 a.a.
• NCBI ID: WP_046380767.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103551
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 290212..301333

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQY76_RS01630 (EQY76_01630)	ycdA	290220..291284 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
EQY76_RS01635 (EQY76_01635)	-	291307..291438 (-)	132	WP_003246334.1	hypothetical protein	-
EQY76_RS01640 (EQY76_01640)	ycdB	291612..293030 (+)	1419	WP_087614255.1	YcdB/YcdC domain-containing protein	-
EQY76_RS01645 (EQY76_01645)	ycdC	293217..294578 (+)	1362	WP_128753678.1	YcdB/YcdC domain-containing protein	-
EQY76_RS01650 (EQY76_01650)	cwlK	294586..295089 (-)	504	WP_017695036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
EQY76_RS01655 (EQY76_01655)	rapF	295212..296333 (+)	1122	WP_046380767.1	response regulator aspartate phosphatase RapJ	Regulator
EQY76_RS01660 (EQY76_01660)	ycdF	296440..297216 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
EQY76_RS01665 (EQY76_01665)	ycdG	297241..298926 (+)	1686	WP_003234736.1	alpha-glucosidase	-
EQY76_RS01670 (EQY76_01670)	znuA	299114..300073 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
EQY76_RS01675 (EQY76_01675)	znuC	300129..300824 (+)	696	WP_003234730.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44356.17 Da
• Isoelectric Point: 4.8344

>NTDB_id=294465 EQY76_RS01655 WP_046380767.1 295212..296333(+) (rapF) [Bacillus subtilis strain SRCM103551]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDSYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=294465 EQY76_RS01655 WP_046380767.1 295212..296333(+) (rapF) [Bacillus subtilis strain SRCM103551]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACTCGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGTTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405