Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | DLJ56_RS06220 | Genome accession | NZ_CP029629 |
| Coordinates | 1176541..1176840 (+) | Length | 99 a.a. |
| NCBI ID | WP_070001831.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain MOK063 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1171541..1181840
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLJ56_RS06180 (DLJ56_06180) | - | 1171602..1171805 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| DLJ56_RS06185 (DLJ56_06185) | - | 1171802..1172788 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| DLJ56_RS06190 (DLJ56_06190) | - | 1172788..1173117 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| DLJ56_RS06195 (DLJ56_06195) | - | 1173114..1173737 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| DLJ56_RS06200 (DLJ56_06200) | comGA | 1173789..1174763 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DLJ56_RS06205 (DLJ56_06205) | comGB | 1174735..1175805 (+) | 1071 | WP_000776421.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DLJ56_RS06210 (DLJ56_06210) | comGC | 1175819..1176130 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DLJ56_RS06215 (DLJ56_06215) | comGD | 1176108..1176554 (+) | 447 | WP_072433556.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DLJ56_RS06220 (DLJ56_06220) | comGE | 1176541..1176840 (+) | 300 | WP_070001831.1 | competence protein ComGE | Machinery gene |
| DLJ56_RS06225 (DLJ56_06225) | comGF | 1176758..1177255 (+) | 498 | WP_029694050.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DLJ56_RS06230 (DLJ56_06230) | - | 1177352..1177498 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| DLJ56_RS06235 (DLJ56_06235) | - | 1177488..1178012 (+) | 525 | WP_001015121.1 | shikimate kinase | - |
| DLJ56_RS06240 (DLJ56_06240) | gcvT | 1178171..1179262 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| DLJ56_RS06245 (DLJ56_06245) | gcvPA | 1179282..1180628 (+) | 1347 | WP_000019691.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11066.13 Da Isoelectric Point: 9.7382
>NTDB_id=294396 DLJ56_RS06220 WP_070001831.1 1176541..1176840(+) (comGE) [Staphylococcus aureus strain MOK063]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINTEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINTEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=294396 DLJ56_RS06220 WP_070001831.1 1176541..1176840(+) (comGE) [Staphylococcus aureus strain MOK063]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATACAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATACAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |
| comGE | Staphylococcus aureus N315 |
97.98 |
100 |
0.98 |