Detailed information NTG0294335

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: EQY74_RS05735
• Genome accession: NZ_CP035228
• Coordinates: 1113226..1114344 (+)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain SRCM103529
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1108226..1119344

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQY74_RS05710 (EQY74_05710)	-	1108426..1109931 (+)	1506	WP_025808244.1	coproporphyrinogen III oxidase	-
EQY74_RS05715 (EQY74_05715)	-	1110013..1111224 (-)	1212	WP_003180218.1	cation:proton antiporter	-
EQY74_RS05720 (EQY74_05720)	-	1111231..1111728 (-)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
EQY74_RS05725 (EQY74_05725)	-	1111793..1112122 (-)	330	WP_016886161.1	hypothetical protein	-
EQY74_RS05730 (EQY74_05730)	-	1112323..1113099 (+)	777	WP_011197707.1	enoyl-CoA hydratase	-
EQY74_RS05735 (EQY74_05735)	rapC	1113226..1114344 (+)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
EQY74_RS23795	-	1114334..1114471 (+)	138	WP_016886158.1	hypothetical protein	-
EQY74_RS05740 (EQY74_05740)	-	1114476..1114754 (+)	279	WP_003180226.1	hypothetical protein	-
EQY74_RS05745 (EQY74_05745)	-	1114829..1115014 (-)	186	WP_003180228.1	YhzD family protein	-
EQY74_RS05750 (EQY74_05750)	-	1115132..1116028 (+)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
EQY74_RS05755 (EQY74_05755)	-	1116021..1117289 (+)	1269	WP_003180232.1	ABC transporter permease	-
EQY74_RS05760 (EQY74_05760)	-	1117409..1118635 (+)	1227	WP_009328954.1	DNA repair exonuclease	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=294335 EQY74_RS05735 WP_009328956.1 1113226..1114344(+) (rapC) [Bacillus licheniformis strain SRCM103529]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=294335 EQY74_RS05735 WP_009328956.1 1113226..1114344(+) (rapC) [Bacillus licheniformis strain SRCM103529]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374