Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EQW70_RS21300 Genome accession   NZ_CP035226
Coordinates   4063390..4064079 (-) Length   229 a.a.
NCBI ID   WP_128740862.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103517     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 4058390..4069079
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQW70_RS21280 (EQW70_21280) yxeA 4059295..4059642 (-) 348 WP_021481023.1 YxeA family protein -
  EQW70_RS21285 (EQW70_21285) yxdM 4059656..4061524 (-) 1869 WP_128740861.1 ABC transporter permease YxdM -
  EQW70_RS21290 (EQW70_21290) yxdL 4061499..4062272 (-) 774 WP_014115765.1 ABC transporter ATP-binding protein YxdL -
  EQW70_RS21295 (EQW70_21295) yxdK 4062416..4063393 (-) 978 WP_021481026.1 two-component system sensor histidine kinase YxdK -
  EQW70_RS21300 (EQW70_21300) braR 4063390..4064079 (-) 690 WP_128740862.1 two-component system response regulator YxdJ Regulator
  EQW70_RS21305 (EQW70_21305) iolJ 4064187..4065059 (-) 873 WP_064671730.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  EQW70_RS21310 (EQW70_21310) iolI 4065080..4065916 (-) 837 WP_049140862.1 2-keto-myo-inositol isomerase -
  EQW70_RS21315 (EQW70_21315) iolH 4066002..4066871 (-) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  EQW70_RS21320 (EQW70_21320) iolG 4066891..4067925 (-) 1035 WP_003244482.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26610.38 Da        Isoelectric Point: 4.8564

>NTDB_id=294304 EQW70_RS21300 WP_128740862.1 4063390..4064079(-) (braR) [Bacillus subtilis strain SRCM103517]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQP

Nucleotide


Download         Length: 690 bp        

>NTDB_id=294304 EQW70_RS21300 WP_128740862.1 4063390..4064079(-) (braR) [Bacillus subtilis strain SRCM103517]
GTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCTGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGCCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406

Multiple sequence alignment