Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EQW70_RS18685 Genome accession   NZ_CP035226
Coordinates   3537746..3538459 (-) Length   237 a.a.
NCBI ID   WP_128740758.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103517     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3532746..3543459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQW70_RS18665 (EQW70_18665) ghrB 3532891..3533868 (+) 978 WP_128740756.1 D-glycerate dehydrogenase -
  EQW70_RS18670 (EQW70_18670) psdB 3533905..3535845 (-) 1941 WP_032726921.1 lantibiotic ABC transporter permease PsdB -
  EQW70_RS18675 (EQW70_18675) psdA 3535820..3536599 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  EQW70_RS18680 (EQW70_18680) psdS 3536682..3537752 (-) 1071 WP_128740757.1 two-component sensor histidine kinase PsdS -
  EQW70_RS18685 (EQW70_18685) braR 3537746..3538459 (-) 714 WP_128740758.1 two-component system response regulator PsdR Regulator
  EQW70_RS18690 (EQW70_18690) - 3538606..3538815 (+) 210 WP_014665489.1 hypothetical protein -
  EQW70_RS18695 (EQW70_18695) yvcN 3538851..3539615 (-) 765 WP_015714771.1 arylamine N-acetyltransferase -
  EQW70_RS18700 (EQW70_18700) crh 3539616..3539873 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  EQW70_RS18705 (EQW70_18705) whiA 3539897..3540847 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  EQW70_RS18710 (EQW70_18710) mgfK 3540870..3541823 (-) 954 WP_049140423.1 gluconeogenesis morphogenetic factor -
  EQW70_RS18715 (EQW70_18715) rapZ 3541825..3542712 (-) 888 WP_003243903.1 RNase adapter RapZ -
  EQW70_RS18720 (EQW70_18720) rppI 3542737..3543213 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27520.49 Da        Isoelectric Point: 4.8300

>NTDB_id=294289 EQW70_RS18685 WP_128740758.1 3537746..3538459(-) (braR) [Bacillus subtilis strain SRCM103517]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAVQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLSIYPDQHEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=294289 EQW70_RS18685 WP_128740758.1 3537746..3538459(-) (braR) [Bacillus subtilis strain SRCM103517]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTAGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGTACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCATTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTATCGATTTATCCTGATCAACATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

44.643

94.515

0.422