Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EQW70_RS16260 Genome accession   NZ_CP035226
Coordinates   3075761..3076456 (-) Length   231 a.a.
NCBI ID   WP_070547660.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103517     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3070761..3081456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQW70_RS16240 (EQW70_16240) yttA 3071188..3071934 (+) 747 WP_128740653.1 LMBR1 domain-containing protein -
  EQW70_RS16245 (EQW70_16245) bceB 3071971..3073911 (-) 1941 WP_128740654.1 bacitracin ABC transporter permease BceB -
  EQW70_RS16250 (EQW70_16250) bceA 3073901..3074662 (-) 762 WP_128740655.1 bacitracin ABC transporter ATP-binding protein BceA -
  EQW70_RS16255 (EQW70_16255) bceS 3074764..3075768 (-) 1005 WP_128740656.1 two-component sensor histidine kinase BceS -
  EQW70_RS16260 (EQW70_16260) braR 3075761..3076456 (-) 696 WP_070547660.1 two-component response regulator BceR Regulator
  EQW70_RS16265 (EQW70_16265) ytrF 3076553..3077863 (-) 1311 WP_021480351.1 ABC transporter permease YtrF -
  EQW70_RS16270 (EQW70_16270) ytrE 3077853..3078548 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  EQW70_RS16275 (EQW70_16275) ytrD 3078563..3079540 (-) 978 WP_041851122.1 ABC transporter permease YtrD -
  EQW70_RS16280 (EQW70_16280) ytrC 3079570..3080556 (-) 987 WP_015483589.1 ABC transporter permease YtrC -
  EQW70_RS16285 (EQW70_16285) ytrB 3080550..3081428 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26909.77 Da        Isoelectric Point: 5.3731

>NTDB_id=294278 EQW70_RS16260 WP_070547660.1 3075761..3076456(-) (braR) [Bacillus subtilis strain SRCM103517]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=294278 EQW70_RS16260 WP_070547660.1 3075761..3076456(-) (braR) [Bacillus subtilis strain SRCM103517]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAACTAATAGAGCAAAAAAACAAGATCGTCAGCCGTGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGTCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377