Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   EQW70_RS10010 Genome accession   NZ_CP035226
Coordinates   1948638..1949255 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain SRCM103517     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1943638..1954255
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQW70_RS09980 (EQW70_09980) yndJ 1943957..1945597 (+) 1641 WP_032725815.1 YndJ family protein -
  EQW70_RS09985 (EQW70_09985) - 1945687..1946001 (+) 315 WP_031314944.1 membrane protein -
  EQW70_RS09990 (EQW70_09990) pghL 1946225..1946983 (+) 759 WP_072176335.1 gamma-polyglutamate hydrolase PghL -
  EQW70_RS09995 (EQW70_09995) - 1947010..1947459 (-) 450 WP_003245454.1 YndM family protein -
  EQW70_RS10000 (EQW70_10000) fosM 1947666..1948100 (+) 435 WP_017697356.1 FosM family fosfomycin resistance protein -
  EQW70_RS22340 - 1948009..1948285 (+) 277 Protein_1916 hypothetical protein -
  EQW70_RS10010 (EQW70_10010) dinR/lexA 1948638..1949255 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  EQW70_RS10015 (EQW70_10015) yneA 1949405..1949722 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  EQW70_RS10020 (EQW70_10020) dinL 1949741..1950394 (+) 654 WP_003231596.1 recombinase family protein -
  EQW70_RS10025 (EQW70_10025) ynzC 1950458..1950691 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  EQW70_RS10030 (EQW70_10030) recP/tkt 1950860..1952863 (+) 2004 WP_003231593.1 transketolase Machinery gene
  EQW70_RS10035 (EQW70_10035) sirA 1953016..1953462 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  EQW70_RS10040 (EQW70_10040) yneF 1953548..1953766 (+) 219 WP_003221221.1 YneF family protein -
  EQW70_RS10045 (EQW70_10045) ynzD 1953840..1954013 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=294235 EQW70_RS10010 WP_003238209.1 1948638..1949255(-) (dinR/lexA) [Bacillus subtilis strain SRCM103517]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=294235 EQW70_RS10010 WP_003238209.1 1948638..1949255(-) (dinR/lexA) [Bacillus subtilis strain SRCM103517]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTCGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCAGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACTGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAACGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACACACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1