Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   DLK06_RS03455 Genome accession   NZ_CP029610
Coordinates   694661..699166 (+) Length   1501 a.a.
NCBI ID   WP_032070562.1    Uniprot ID   A0AAE9MA91
Organism   Acinetobacter pittii strain ST220     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 689661..704166
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DLK06_RS03430 (DLK06_03430) pilG 689979..690362 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  DLK06_RS03435 (DLK06_03435) pilH 690385..690747 (+) 363 WP_002116220.1 response regulator -
  DLK06_RS03440 (DLK06_03440) pilI 690808..691332 (+) 525 WP_126117478.1 chemotaxis protein CheW -
  DLK06_RS03445 (DLK06_03445) - 691360..692292 (+) 933 WP_126117455.1 IS5-like element ISAha3 family transposase -
  DLK06_RS03450 (DLK06_03450) pilJ 692435..694513 (+) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -
  DLK06_RS03455 (DLK06_03455) chpA 694661..699166 (+) 4506 WP_032070562.1 hybrid sensor histidine kinase/response regulator Regulator
  DLK06_RS03460 (DLK06_03460) - 699166..699633 (+) 468 WP_002116250.1 hypothetical protein -
  DLK06_RS03465 (DLK06_03465) dapE 699668..700804 (-) 1137 WP_032056673.1 succinyl-diaminopimelate desuccinylase -
  DLK06_RS03470 (DLK06_03470) - 700931..701074 (-) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  DLK06_RS03475 (DLK06_03475) - 701198..702079 (-) 882 WP_032056672.1 DUF1853 family protein -
  DLK06_RS03480 (DLK06_03480) - 702183..702551 (+) 369 WP_017400240.1 YbaN family protein -
  DLK06_RS03485 (DLK06_03485) elsL 702764..703267 (+) 504 WP_032056671.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 171525.01 Da        Isoelectric Point: 4.4219

>NTDB_id=294186 DLK06_RS03455 WP_032070562.1 694661..699166(+) (chpA) [Acinetobacter pittii strain ST220]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFVEEIEEIFVELQSLIHEWMQSENVATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLGLTPDIQQYVQLVFKFYFFKLVDDFKSKKNHTLDFRPLILLGQQLQQQQSIEPALDELLLLS
DILTAETQTGLEANDLEPESTEVLTILTPEVAIETEQTLAETLILFMEEAEEHLATIDQFLEKEIHQHESYNALIRALHT
LRGSSAMAHVEPIFEASTKVEHLFKILLQEELSSHSEEVSLLRDYRQFIRNSLDLLAAHCSTEQLESDLQKFNQVWDAYM
EQHGEHSSPLMPPHGLVSQLLQLDVAELLDAELDFEKGIRTEFPHYLERLSEQADVLLQHTQSQAMIGLYEYTNQLKESY
DILLDRPDLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLDELKLYTQYIPNLNSESLETHQDVFEPLFNA
EVEQTANEPLIENVFTDQVTIGQSVQLDRQFISSEHVNRHFDPDLLDIFLEEADELLEGMDTDLNLWVNDQENFAALNNL
MRYLHTLKGGANMIQATYIGLIAHELESIYERLIQKQLIVSSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKN
AGQVFDSHIKESKTEPETYVIPELNFEVLQQEAINNTALNLSELTSASEQIAKSNNQLVEQTELQVLYADHDHTESIPDQ
DINTVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEQFALHHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIERAIQIPSKLTRTDLFSTEPVMSFVQGDGTEPPPMMGEWE
QAQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIEN
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTTLNRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAKKPETGRIELNIHRQGTDVVVTF
KDDGQGIDIEKVRQKALMSGLINPEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSEQELFEFENKRYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRHK
SLNETIYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDIPVIMITSRTGEKHRERAFTLGVNQYMGKPFQEEDLLDNIDALFMTFEGRLA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=294186 DLK06_RS03455 WP_032070562.1 694661..699166(+) (chpA) [Acinetobacter pittii strain ST220]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTACTCTCAACAAGATGATGAATTTCT
TGAAATATTTGTCGAAGAAATTGAAGAAATTTTTGTTGAATTACAATCTTTGATTCACGAATGGATGCAATCTGAAAATG
TTGCTACGCTTACTGAAATCCGCCGTCATTTTCATACATTGAAAGGTTCAGGGCGAATGATTGGGGCCAAATCTTCTGCT
GAGCTTGCTTGGACTGTGGAAGATACGCTTAATCGGGTAATCAATCAGAGTCTCGGATTAACTCCTGACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAGTTAGTAGATGACTTCAAATCTAAAAAAAATCATACCCTAGACTTTA
GGCCCCTAATTTTATTGGGACAACAATTACAGCAACAGCAAAGTATAGAACCCGCGTTAGACGAACTTTTATTATTATCA
GATATTCTTACTGCTGAAACTCAAACTGGTTTAGAAGCGAATGACTTAGAACCAGAATCTACAGAAGTTTTAACTATTTT
GACTCCAGAAGTTGCTATAGAAACTGAACAGACTCTTGCTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAGCACT
TAGCGACAATTGATCAGTTTTTGGAAAAAGAAATACATCAGCATGAAAGTTATAATGCTCTAATACGTGCGTTACATACA
TTACGTGGCAGCTCTGCCATGGCTCATGTAGAACCAATCTTTGAAGCTAGTACCAAAGTTGAGCATTTATTTAAAATACT
ATTACAAGAAGAGCTTTCTTCTCATTCAGAAGAAGTTTCATTACTCCGTGATTATCGTCAGTTTATTCGAAATAGTTTAG
ATCTATTGGCTGCACATTGCTCTACTGAGCAATTGGAATCTGATCTACAAAAATTTAATCAGGTTTGGGATGCTTACATG
GAGCAGCATGGTGAGCATTCGAGCCCACTCATGCCTCCACATGGTTTAGTGTCTCAGCTATTACAGCTAGATGTTGCTGA
ATTACTTGATGCGGAATTAGACTTTGAGAAGGGAATACGTACAGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTTTTGCTGCAACATACTCAGTCGCAGGCAATGATTGGTTTATATGAATATACTAACCAGTTGAAAGAAAGCTAC
GACATATTGCTTGATCGACCTGATTTATTGCAATCAGATTATATTTTTGAAATTTATCAAAAAGCGCACCAACAATTAAT
TCAGTTATTTGATGCATTAGCTGCGGGACAAAGAGTAAGTATCATCGAGCAACACCAAAATGTCTTGGATGAGCTAAAAC
TATATACTCAATATATTCCAAATCTTAATTCCGAATCATTAGAAACTCATCAAGACGTTTTTGAACCATTGTTTAATGCT
GAAGTTGAACAAACGGCGAATGAACCTCTGATAGAAAATGTATTCACTGATCAGGTCACCATAGGACAGAGTGTACAACT
AGATCGACAGTTTATTTCGTCTGAGCATGTAAACCGTCATTTTGATCCAGATCTTTTAGATATTTTTCTTGAAGAAGCCG
ATGAGTTGCTTGAGGGAATGGATACAGATCTTAATCTTTGGGTTAATGATCAAGAAAACTTTGCCGCTCTCAATAATCTG
ATGCGTTATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAGTTAGA
AAGTATTTATGAGCGTTTAATTCAAAAACAGTTGATAGTTTCGTCTGCTCTCATTGATTTTATTCGACTAGTTCAAGATG
ACTTGGCTGACCGTCTTCAAATAGTGCGTGAACAGCACCTAGATTATGCTGCTTCTCATACTATTCAAGCACTTAAAAAT
GCAGGTCAGGTATTTGATTCTCATATTAAAGAGAGCAAAACAGAACCTGAAACGTATGTTATACCTGAATTAAATTTTGA
AGTATTACAACAAGAAGCGATAAATAATACGGCGTTAAACCTCAGTGAGTTAACTTCTGCTTCTGAGCAGATTGCTAAGT
CTAATAATCAACTTGTTGAGCAAACCGAATTACAAGTTCTTTATGCTGATCACGATCATACAGAGAGTATCCCAGATCAA
GATATTAATACTGTTGTCGAGCAGACATTCATGGAGGAAGCGGCCGAACTATTAGAAATGGCCGATCACTTATTAAAACA
ATGGTTCGAGCAACGTACTAACCGTAGTATCTTGCTTCAACTACAAAGAGCAGTGCACAGCTTGAAAGGCGGTTCCCGTA
TGCTGGGACTTGAAACCGTGCAAGCGATTGCTTATCAACTTGAGAATGCTTTTGAACAATTTGCGCTTCATCATTTCAGC
TCAAATATTTATGACAACTTATTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCAATTTTTAAACAAAATTATCAACACTT
CGATGGTTTACAACAAAGTCTGGAAAATATCCAGTTCATTGAAAGAGCAATTCAAATTCCTAGTAAGTTAACTAGAACTG
ATCTATTCAGCACGGAACCTGTAATGAGTTTTGTGCAAGGTGACGGTACAGAACCACCGCCAATGATGGGTGAGTGGGAA
CAAGCACAACGCCTTGATCAAAATAATGAGATGATTCGAGTCTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGG
TGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATTTAAGCCAATTTGGTCATACCTTAGCGGAAATGGAATTGGCTA
TTCAGCGACTTGCAGATCAGTTGCGTCGAATGGAAGGTGAATTGGAAACCCAAATTATTGCAAAGCACGGTATTGAGAAC
TCACGTTATACGGAATTTGATCCTTTAGAGATGGACCAATATTCTTCATTAAATCAGTTATCAAAGTCTCTTGCCGAGTC
TGCATCGGATTTAGTAGATTTTAAAAATACATTATCTGAAAAGATCAGAGACACTGAAGGTTTATTGGTACAGCAATCGC
GTATTCAGGCTGAAATTCAAGAAGGTCTTATGCGAACACGCTTAGTACCATTTTCTCGATTATTGCCTCGTCTGCAAAGA
ATTGTGAGGCAGACTTCTACCACGTTAAATCGACCAGCGGAGCTTTTTGTTAATAATACAGAAGGCGAGCTGGACCGGAC
AATGTTAGAACGTTTGGTTACGCCACTTGAGCACATGCTTAGAAATGCAATTGACCATGGATTAGAAGACCGTGCGCAAC
GTGAACAAGCTAAAAAACCAGAAACTGGACGCATTGAACTCAATATTCATCGTCAAGGTACAGATGTTGTAGTTACATTT
AAGGATGATGGGCAAGGTATTGATATCGAGAAGGTTCGTCAAAAGGCGTTAATGTCTGGTTTGATTAATCCAGAGCAAGT
ATTAGAACATCAAGATATTTTACAGCTGATTTTCCATCCTGGTTTAAGTACAGCCGATCAAGTCACTCAGATTTCAGGCC
GTGGCGTCGGACTGGATGTCGTGCAAAGTGATATTAAGGCCTTAGGTGGCCATGTGAGTGTCGACTCTGTATACGGGCAG
GGAACTGTCTTTACCATACGTGTTCCAACGACAGTAGCTGTTAGTGATGCTTTAATGGTTAAAGTTGCTGATCAGCAATT
TGCAATCCCACTGGCGCAGATTGATCGAATTGTACGAGTTTCACCAGCATCATTAGAACAATATTTCGGAAGTGAACAAG
AGCTCTTTGAATTTGAAAATAAGCGCTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCAATTCCGCGCTTA
AGTGGAATGATGTATTCATTACCAGTATTAATGATTAAGGCAAATAATGGACAAACCGTCGCCTTATTAGTTGACCAACT
GATTGGCTCACGCGCACAGATTGTAGTTAAGCCAATAGGACAACAATTCTCTAGCATTGGTGCGATTGCAGGAGCAACTA
TTTTAGGTGATGGTCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAATCTACTCGCCGACATAAA
TCGCTTAATGAAACTATCTATAGACAACGCGAGTCTGATGAGCGACGTCTTATCATGATTGTAGATGACTCGGTAACTGT
ACGTAAGGTGACGTCTCGCTTACTTGAACGTCAGGGCTATGATGTAGTCACAGCTAAAGATGGGGTTGATGCGATTGAGC
AATTGGAAAATATTAAACCAGATCTCATGTTACTTGATATTGAAATGCCACGAATGGATGGCTTTGAGGTACTTAATCTC
GTTCGACATCATGATCTACATCAAGATATACCAGTGATTATGATTACATCACGAACTGGTGAAAAACACCGTGAACGAGC
ATTTACTTTAGGTGTGAACCAATACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTGACAATATTGATGCGTTATTCA
TGACATTTGAAGGGAGACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

80.013

100

0.805


Multiple sequence alignment