Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | DLK06_RS01765 | Genome accession | NZ_CP029610 |
| Coordinates | 365884..366357 (+) | Length | 157 a.a. |
| NCBI ID | WP_032057265.1 | Uniprot ID | A0AAE9M926 |
| Organism | Acinetobacter pittii strain ST220 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 360884..371357
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLK06_RS01740 (DLK06_01740) | spoT | 361346..363451 (-) | 2106 | WP_032057263.1 | RelA/SpoT family protein | - |
| DLK06_RS01745 (DLK06_01745) | - | 363467..363622 (-) | 156 | Protein_333 | hypothetical protein | - |
| DLK06_RS01750 (DLK06_01750) | rpoZ | 363661..363939 (-) | 279 | WP_002116990.1 | DNA-directed RNA polymerase subunit omega | - |
| DLK06_RS01755 (DLK06_01755) | gmk | 364012..364641 (-) | 630 | WP_005804544.1 | guanylate kinase | - |
| DLK06_RS01760 (DLK06_01760) | ispH | 364764..365714 (+) | 951 | WP_002116992.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| DLK06_RS01765 (DLK06_01765) | fimU | 365884..366357 (+) | 474 | WP_032057265.1 | pilus assembly FimT family protein | Machinery gene |
| DLK06_RS01770 (DLK06_01770) | pilV | 366351..366911 (+) | 561 | WP_080777128.1 | type IV pilus modification protein PilV | Machinery gene |
| DLK06_RS01775 (DLK06_01775) | pilW | 366911..367912 (+) | 1002 | WP_032057268.1 | PilW family protein | Machinery gene |
| DLK06_RS01780 (DLK06_01780) | pilX | 367909..368718 (+) | 810 | WP_005067126.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16882.57 Da Isoelectric Point: 7.7942
>NTDB_id=294175 DLK06_RS01765 WP_032057265.1 365884..366357(+) (fimU) [Acinetobacter pittii strain ST220]
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNIAQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNIAQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=294175 DLK06_RS01765 WP_032057265.1 365884..366357(+) (fimU) [Acinetobacter pittii strain ST220]
ATGAGGGGAATTATTCCACAAGACGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTCATGGCTATTATCGCGAT
GATGGCCGCGCCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAACCAACGAGATCTAATCAATACTTTAT
CGGAAGCAAAGAGCCAAGCCATACTTGGTCGACAAGACGTTTCTATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAGCTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCGTTAAC
AGCGACGACTTTAACTTTTAATGCGAATGGGGTGATAACCAATATCGCCCAAGACACACTTTTATCTATCTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTCTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
ATGAGGGGAATTATTCCACAAGACGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTCATGGCTATTATCGCGAT
GATGGCCGCGCCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAACCAACGAGATCTAATCAATACTTTAT
CGGAAGCAAAGAGCCAAGCCATACTTGGTCGACAAGACGTTTCTATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAGCTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCGTTAAC
AGCGACGACTTTAACTTTTAATGCGAATGGGGTGATAACCAATATCGCCCAAGACACACTTTTATCTATCTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTCTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
87.898 |
100 |
0.879 |