Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EQJ84_RS15215 Genome accession   NZ_CP035191
Coordinates   2941931..2942626 (-) Length   231 a.a.
NCBI ID   WP_041851120.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM104011     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2936931..2947626
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQJ84_RS15195 (EQJ84_15195) yttA 2937358..2938104 (+) 747 WP_014477720.1 LMBR1 domain-containing protein -
  EQJ84_RS15200 (EQJ84_15200) bceB 2938141..2940081 (-) 1941 WP_041851118.1 bacitracin ABC transporter permease BceB -
  EQJ84_RS15205 (EQJ84_15205) bceA 2940071..2940832 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  EQJ84_RS15210 (EQJ84_15210) bceS 2940934..2941938 (-) 1005 WP_041851119.1 two-component sensor histidine kinase BceS -
  EQJ84_RS15215 (EQJ84_15215) braR 2941931..2942626 (-) 696 WP_041851120.1 two-component response regulator BceR Regulator
  EQJ84_RS15220 (EQJ84_15220) ytrF 2942723..2944033 (-) 1311 WP_041851121.1 ABC transporter permease YtrF -
  EQJ84_RS15225 (EQJ84_15225) ytrE 2944023..2944718 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  EQJ84_RS15230 (EQJ84_15230) ytrD 2944733..2945710 (-) 978 WP_041851122.1 ABC transporter permease YtrD -
  EQJ84_RS15235 (EQJ84_15235) ytrC 2945740..2946725 (-) 986 Protein_2948 ABC transporter permease YtrC -
  EQJ84_RS15240 (EQJ84_15240) ytrB 2946719..2947597 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26908.82 Da        Isoelectric Point: 5.3775

>NTDB_id=294126 EQJ84_RS15215 WP_041851120.1 2941931..2942626(-) (braR) [Bacillus subtilis strain SRCM104011]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLEVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=294126 EQJ84_RS15215 WP_041851120.1 2941931..2942626(-) (braR) [Bacillus subtilis strain SRCM104011]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCAGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
AGAGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAACTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGAGGTCCTGCAGCTAGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment