Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   DL538_RS04970 Genome accession   NZ_CP029609
Coordinates   942834..943628 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis subsp. subtilis strain G7     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 937834..948628
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DL538_RS04940 (DL538_04925) sxzA 938673..939704 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  DL538_RS04945 (DL538_04930) yfhB 939819..940700 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  DL538_RS04950 (DL538_04935) yfhC 940788..941372 (+) 585 WP_003243940.1 nitroreductase -
  DL538_RS04955 (DL538_04940) yfhD 941411..941602 (-) 192 WP_003233561.1 YfhD family protein -
  DL538_RS04960 (DL538_04945) yfhE 941669..941779 (-) 111 WP_003223230.1 YfhE family protein -
  DL538_RS04965 (DL538_04950) yfhF 941834..942745 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  DL538_RS04970 (DL538_04955) recX 942834..943628 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  DL538_RS04975 (DL538_04960) yfhH 943630..943944 (+) 315 WP_003244592.1 YfhH family protein -
  DL538_RS04980 (DL538_04965) yfhI 944087..945280 (+) 1194 WP_003243500.1 MFS transporter -
  DL538_RS04985 (DL538_04970) sspK 945313..945465 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  DL538_RS04990 (DL538_04975) yfhJ 945590..945859 (+) 270 WP_003243789.1 YfhJ family protein -
  DL538_RS04995 (DL538_04980) yfhK 946004..946522 (+) 519 WP_029317456.1 SH3 domain-containing protein -
  DL538_RS05000 (DL538_04985) spdL 946607..946924 (+) 318 WP_038428649.1 SdpC immunity protein SpdL -
  DL538_RS05005 (DL538_04990) ephM 946926..947786 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=294101 DL538_RS04970 WP_003243354.1 942834..943628(+) (recX) [Bacillus subtilis subsp. subtilis strain G7]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=294101 DL538_RS04970 WP_003243354.1 942834..943628(+) (recX) [Bacillus subtilis subsp. subtilis strain G7]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment