Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DLD99_RS27035 Genome accession   NZ_CP029608
Coordinates   5903776..5904180 (-) Length   134 a.a.
NCBI ID   WP_085709083.1    Uniprot ID   -
Organism   Pseudomonas kribbensis strain 46-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5898776..5909180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DLD99_RS27020 (DLD99_27015) - 5900726..5902786 (-) 2061 WP_085709085.1 methyl-accepting chemotaxis protein -
  DLD99_RS27025 (DLD99_27020) - 5902800..5903339 (-) 540 WP_085709084.1 chemotaxis protein CheW -
  DLD99_RS27030 (DLD99_27025) pilH 5903350..5903715 (-) 366 WP_011336365.1 twitching motility response regulator PilH -
  DLD99_RS27035 (DLD99_27030) pilG 5903776..5904180 (-) 405 WP_085709083.1 twitching motility response regulator PilG Regulator
  DLD99_RS27040 (DLD99_27035) gshB 5904406..5905356 (+) 951 WP_114886081.1 glutathione synthase -
  DLD99_RS27045 (DLD99_27040) - 5905464..5906363 (+) 900 WP_114886083.1 energy transducer TonB -
  DLD99_RS27050 (DLD99_27045) - 5906534..5907106 (+) 573 WP_085709080.1 YqgE/AlgH family protein -
  DLD99_RS27055 (DLD99_27050) ruvX 5907106..5907543 (+) 438 WP_085709079.1 Holliday junction resolvase RuvX -
  DLD99_RS27060 (DLD99_27055) pyrR 5907625..5908128 (+) 504 WP_114886085.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  DLD99_RS27065 (DLD99_27060) - 5908156..5909160 (+) 1005 WP_025109148.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14524.83 Da        Isoelectric Point: 5.7193

>NTDB_id=294081 DLD99_RS27035 WP_085709083.1 5903776..5904180(-) (pilG) [Pseudomonas kribbensis strain 46-2]
MEQQSSALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLDAIAAHVPGFAADLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=294081 DLD99_RS27035 WP_085709083.1 5903776..5904180(-) (pilG) [Pseudomonas kribbensis strain 46-2]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGTCGCACCGCCGAGACCCTGTT
GAAAAATGCAGGGTGCGAAGTCATCACGGCGATCGACGGTTTCGACGCCCTGGCGAAGATCGCCGACAACCACCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCCTTCAAG
GCGACGCCGGTGATCATGCTGTCGTCCCGCGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAATT
TTTGACCAAACCTTTCAGCAAGGAAGAACTGCTCGACGCGATTGCGGCCCATGTTCCGGGCTTTGCCGCTGATTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694

Multiple sequence alignment