Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C1M51_RS05615 Genome accession   NZ_CP029606
Coordinates   1192018..1192431 (-) Length   137 a.a.
NCBI ID   WP_207207831.1    Uniprot ID   -
Organism   Methylibium sp. Pch-M     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1187018..1197431
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C1M51_RS05600 (C1M51_05555) - 1188632..1190959 (-) 2328 WP_165349650.1 methyl-accepting chemotaxis protein -
  C1M51_RS05605 (C1M51_05560) - 1191021..1191545 (-) 525 WP_129448597.1 chemotaxis protein CheW -
  C1M51_RS05610 (C1M51_05565) - 1191586..1191951 (-) 366 WP_011830765.1 PleD family two-component system response regulator -
  C1M51_RS05615 (C1M51_05570) pilG 1192018..1192431 (-) 414 WP_207207831.1 PleD family two-component system response regulator Regulator
  C1M51_RS05620 (C1M51_05575) - 1192470..1192622 (-) 153 WP_011830767.1 rubredoxin -
  C1M51_RS05625 (C1M51_05580) - 1192802..1193761 (+) 960 WP_129448598.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  C1M51_RS05630 (C1M51_05585) hemL 1193778..1195088 (+) 1311 WP_129448599.1 glutamate-1-semialdehyde 2,1-aminomutase -
  C1M51_RS05635 (C1M51_05590) - 1195105..1195935 (+) 831 WP_129448600.1 D-hexose-6-phosphate mutarotase -
  C1M51_RS05640 (C1M51_05595) - 1195948..1196421 (-) 474 WP_129448601.1 DUF6152 family protein -
  C1M51_RS05645 (C1M51_05600) - 1196441..1196893 (-) 453 WP_129448602.1 hypothetical protein -

Sequence

Protein


Download         Length: 137 a.a.        Molecular weight: 15278.51 Da        Isoelectric Point: 6.7140

>NTDB_id=294044 C1M51_RS05615 WP_207207831.1 1192018..1192431(-) (pilG) [Methylibium sp. Pch-M]
MTQEGQESGEAATAEAIRVLVIDDSNTIRRSAEIFLKQGGYVVVLAEDGFDALAKVNDHQPHLIFCDILMPRLDGYQTCA
IIKRNPRFSGVPVIMLSSKDGLFDKARGRMVGSEDYLTKPFTKDQLLRAVEQHRRVA

Nucleotide


Download         Length: 414 bp        

>NTDB_id=294044 C1M51_RS05615 WP_207207831.1 1192018..1192431(-) (pilG) [Methylibium sp. Pch-M]
CTGACGCAAGAAGGGCAGGAGAGCGGGGAGGCCGCGACCGCCGAAGCCATCCGCGTGCTCGTCATCGACGACAGCAACAC
CATCCGGCGCAGCGCCGAGATCTTCCTGAAGCAGGGCGGATACGTGGTCGTGCTGGCCGAGGACGGCTTCGATGCGCTGG
CCAAGGTCAATGATCACCAGCCGCATCTCATCTTTTGCGACATCCTGATGCCGCGACTCGATGGTTACCAGACCTGCGCG
ATCATCAAGCGCAACCCCAGGTTCTCCGGCGTACCGGTGATCATGCTGTCCTCGAAGGACGGCCTGTTCGACAAGGCACG
GGGCCGCATGGTCGGCTCCGAGGACTACCTGACCAAGCCTTTCACCAAAGACCAGTTGCTGCGAGCGGTGGAACAGCACC
GCCGCGTTGCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(19-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.824

86.861

0.511

Multiple sequence alignment