Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DKY66_RS02590 Genome accession   NZ_CP029561
Coordinates   433544..434269 (+) Length   241 a.a.
NCBI ID   WP_000912314.1    Uniprot ID   A0AAW6XYE4
Organism   Streptococcus agalactiae strain 32790-3A     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 428544..439269
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DKY66_RS02555 (DKY66_02555) tsaE 429346..429789 (+) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DKY66_RS02560 (DKY66_02560) - 429782..430303 (+) 522 WP_000043149.1 GNAT family N-acetyltransferase -
  DKY66_RS02565 (DKY66_02565) - 430312..431619 (+) 1308 WP_000708161.1 LCP family protein -
  DKY66_RS02570 (DKY66_02570) - 431683..431979 (-) 297 WP_000690175.1 hypothetical protein -
  DKY66_RS02575 (DKY66_02575) - 431976..432395 (-) 420 WP_000368099.1 HIT family protein -
  DKY66_RS02580 (DKY66_02580) - 432731..433234 (+) 504 WP_000773459.1 hypothetical protein -
  DKY66_RS02585 (DKY66_02585) - 433286..433472 (-) 187 Protein_416 hypothetical protein -
  DKY66_RS02590 (DKY66_02590) pptA 433544..434269 (+) 726 WP_000912314.1 ABC transporter ATP-binding protein Regulator
  DKY66_RS02595 (DKY66_02595) - 434271..435305 (+) 1035 WP_000732710.1 ABC transporter permease -
  DKY66_RS02600 (DKY66_02600) ccrZ 435363..436163 (+) 801 WP_050151850.1 cell cycle regulator CcrZ -
  DKY66_RS02605 (DKY66_02605) trmB 436153..436788 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DKY66_RS02615 (DKY66_02615) rimP 437277..437753 (+) 477 WP_041971671.1 ribosome maturation factor RimP -
  DKY66_RS02620 (DKY66_02620) nusA 437789..438940 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  DKY66_RS02625 (DKY66_02625) rnpM 438962..439258 (+) 297 WP_001140526.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26834.27 Da        Isoelectric Point: 4.6310

>NTDB_id=293620 DKY66_RS02590 WP_000912314.1 433544..434269(+) (pptA) [Streptococcus agalactiae strain 32790-3A]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEANQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=293620 DKY66_RS02590 WP_000912314.1 433544..434269(+) (pptA) [Streptococcus agalactiae strain 32790-3A]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACCATTGATGGCATTAGTCTTGAAGCCAACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAGACACCAAGTCTCTATGAGGAACTAACTCTCAGAGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATCTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.406

99.17

0.768
  pptA Streptococcus salivarius strain HSISS4

76.987

99.17

0.763

Multiple sequence alignment