Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DCD74_RS00920 Genome accession   NZ_CP029556
Coordinates   202088..202483 (+) Length   131 a.a.
NCBI ID   WP_112925664.1    Uniprot ID   A0A344J332
Organism   Solilutibacter oculi strain 83-4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 197088..207483
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DCD74_RS00895 (DCD74_00895) tsaB 197508..198209 (+) 702 WP_112925659.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  DCD74_RS00900 (DCD74_00900) - 198221..199363 (+) 1143 WP_112925660.1 hypothetical protein -
  DCD74_RS00905 (DCD74_00905) lepB 199430..200047 (+) 618 WP_112925661.1 signal peptidase I -
  DCD74_RS00910 (DCD74_00910) - 200048..200935 (-) 888 WP_112925662.1 energy transducer TonB -
  DCD74_RS00915 (DCD74_00915) gshB 200932..201891 (-) 960 WP_112925663.1 glutathione synthase -
  DCD74_RS00920 (DCD74_00920) pilG 202088..202483 (+) 396 WP_112925664.1 twitching motility response regulator PilG Regulator
  DCD74_RS00925 (DCD74_00925) - 202498..202863 (+) 366 WP_112925665.1 PleD family two-component system response regulator -
  DCD74_RS00930 (DCD74_00930) - 202866..203453 (+) 588 WP_112925666.1 chemotaxis protein CheW -
  DCD74_RS00935 (DCD74_00935) - 203525..205540 (+) 2016 WP_112925667.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14616.89 Da        Isoelectric Point: 6.4655

>NTDB_id=293479 DCD74_RS00920 WP_112925664.1 202088..202483(+) (pilG) [Solilutibacter oculi strain 83-4]
MQEGNAAGLEGLKVMVIDDSKTIRRTAETLLKREGCEVVTANDGFEALAKIADQHPHIIFVDIMMPRLDGYQTCALIKNN
QVFKTTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRTYVNA

Nucleotide


Download         Length: 396 bp        

>NTDB_id=293479 DCD74_RS00920 WP_112925664.1 202088..202483(+) (pilG) [Solilutibacter oculi strain 83-4]
ATGCAGGAAGGTAACGCCGCTGGCCTCGAAGGCCTGAAGGTGATGGTGATCGACGATTCCAAGACGATCCGTCGCACGGC
GGAGACGTTGCTCAAGCGGGAAGGCTGCGAGGTCGTGACCGCCAACGACGGCTTCGAGGCGCTGGCCAAGATCGCCGACC
AGCACCCGCACATCATCTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCGCTCATCAAGAACAAC
CAGGTATTCAAGACCACGCCCGTCATCATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCGCGGGGCCGCATCGTCGG
CTCCGAGCAGTACCTCACGAAACCGTTTACCCGAGAGGAACTGCTGGACGCGATCCGCACTTACGTCAACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(14-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A344J332

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

94.656

0.702

Multiple sequence alignment