Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EQI87_RS18165 Genome accession   NZ_CP035166
Coordinates   3460096..3460809 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain SRCM103971     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3455096..3465809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQI87_RS18145 (EQI87_18145) ghrB 3455240..3456217 (+) 978 WP_015251153.1 D-glycerate dehydrogenase -
  EQI87_RS18150 (EQI87_18150) psdB 3456255..3458195 (-) 1941 WP_029725972.1 lantibiotic ABC transporter permease PsdB -
  EQI87_RS18155 (EQI87_18155) psdA 3458170..3458949 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  EQI87_RS18160 (EQI87_18160) psdS 3459032..3460102 (-) 1071 WP_046381357.1 two-component sensor histidine kinase PsdS -
  EQI87_RS18165 (EQI87_18165) braR 3460096..3460809 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  EQI87_RS18170 (EQI87_18170) yvzJ 3460956..3461165 (+) 210 WP_003243327.1 lipoprotein -
  EQI87_RS18175 (EQI87_18175) yvcN 3461201..3461965 (-) 765 WP_009968228.1 arylamine N-acetyltransferase -
  EQI87_RS18180 (EQI87_18180) crh 3461966..3462223 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  EQI87_RS18185 (EQI87_18185) whiA 3462247..3463197 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  EQI87_RS18190 (EQI87_18190) mgfK 3463220..3464173 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  EQI87_RS18195 (EQI87_18195) rapZ 3464175..3465062 (-) 888 WP_003243903.1 RNase adapter RapZ -
  EQI87_RS18200 (EQI87_18200) rppI 3465087..3465563 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=293372 EQI87_RS18165 WP_003244535.1 3460096..3460809(-) (braR) [Bacillus subtilis strain SRCM103971]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=293372 EQI87_RS18165 WP_003244535.1 3460096..3460809(-) (braR) [Bacillus subtilis strain SRCM103971]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43