Detailed information NTG0293271

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: EQI87_RS04140
• Genome accession: NZ_CP035166
• Coordinates: 768422..769549 (-)
• Length: 375 a.a.
• NCBI ID: WP_052728183.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103971
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 763422..774549

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQI87_RS04120 (EQI87_04120)	-	765384..765986 (+)	603	WP_046380830.1	hypothetical protein	-
EQI87_RS04125 (EQI87_04125)	-	765986..767857 (+)	1872	WP_046380831.1	hypothetical protein	-
EQI87_RS21825 (EQI87_04130)	-	767958..768116 (-)	159	WP_121509446.1	YgjP-like metallopeptidase domain-containing protein	-
EQI87_RS04135 (EQI87_04135)	-	768235..768432 (-)	198	WP_003240078.1	hypothetical protein	-
EQI87_RS04140 (EQI87_04140)	rapC	768422..769549 (-)	1128	WP_052728183.1	tetratricopeptide repeat protein	Regulator
EQI87_RS04145 (EQI87_04145)	-	769738..769974 (-)	237	Protein_760	hypothetical protein	-
EQI87_RS04150 (EQI87_04150)	-	770124..770516 (-)	393	WP_046380833.1	hypothetical protein	-
EQI87_RS04155 (EQI87_04155)	-	770849..771319 (-)	471	WP_046380834.1	antitoxin YezG family protein	-
EQI87_RS04160 (EQI87_04160)	yeeF	771324..773330 (-)	2007	WP_046380835.1	LXG family T7SS effector deoxyribonuclease toxin YeeF	-
EQI87_RS04165 (EQI87_04165)	-	773497..773835 (+)	339	WP_021481280.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44492.19 Da
• Isoelectric Point: 6.6870

>NTDB_id=293271 EQI87_RS04140 WP_052728183.1 768422..769549(-) (rapC) [Bacillus subtilis strain SRCM103971]
MGTISSPHVGMKINEWNRHIQKFNVTDAEMLKAEIERDIDIMEEDQDLLIYYQLIAFRHQLMIDYVIPTEGNQMELSEYL
KRIEGSNRKMEKLVEYYYYFFQGMYEFKEGNFLSAITFYQKAENTIPYISDEIERAEFYFKMAEVFYHMKQTHVSMHYSS
QAYNIYKTHDLYSVRRIQCHFVIAGNYDDLESHEKALPHLEQALKGARLLESKNKRIYGQALFNIGNCYLKMGELTKAAK
YMEKSIFQFKKSNFNNLTQAYHDLALIYFLQHKQEQAMDCFRKGVRFACKFDDDLFKIMFEGLQTLFIKKGEASILLNVF
NKLETSQGYPYMEELALLAAKFYTEIGQMDDSVICFKKMVHARKQIQRGDCLYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=293271 EQI87_RS04140 WP_052728183.1 768422..769549(-) (rapC) [Bacillus subtilis strain SRCM103971]
TTGGGCACGATTTCGTCTCCGCACGTTGGGATGAAAATTAATGAGTGGAACCGGCATATTCAAAAGTTTAATGTGACTGA
CGCTGAAATGCTTAAAGCTGAGATCGAACGGGACATTGACATCATGGAAGAAGACCAAGACCTCTTGATTTACTATCAGC
TCATTGCATTTCGCCATCAGCTTATGATTGACTATGTGATTCCTACTGAAGGAAACCAAATGGAGTTATCAGAATATTTA
AAGAGAATTGAAGGCAGCAACAGGAAGATGGAGAAGCTCGTTGAATACTACTATTACTTTTTTCAAGGAATGTATGAATT
CAAAGAGGGCAATTTCTTAAGTGCCATTACATTCTATCAAAAAGCGGAAAACACAATTCCCTATATTTCAGATGAAATTG
AGCGGGCGGAATTTTATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAAACCCACGTATCCATGCACTATTCTTCT
CAGGCGTATAACATCTATAAAACGCACGACCTTTACTCAGTCCGCCGCATACAATGCCATTTTGTAATAGCAGGTAATTA
CGACGATTTAGAAAGTCATGAAAAGGCGCTCCCTCACCTCGAACAGGCACTAAAAGGCGCACGGCTGCTTGAAAGCAAAA
ACAAGCGGATTTACGGCCAAGCTTTATTCAATATCGGAAATTGTTATCTTAAAATGGGAGAATTGACGAAAGCAGCAAAA
TACATGGAGAAATCGATATTCCAATTTAAAAAATCAAATTTCAACAACTTGACACAAGCTTACCACGATTTAGCCTTAAT
TTATTTTCTTCAACATAAACAAGAACAGGCAATGGATTGTTTCAGAAAAGGCGTACGCTTCGCATGTAAATTCGATGATG
ACCTATTTAAAATTATGTTTGAAGGATTGCAGACGCTGTTTATCAAAAAAGGAGAAGCGTCCATTTTATTAAATGTTTTC
AACAAATTAGAGACATCCCAAGGATATCCTTATATGGAAGAGTTGGCATTATTAGCCGCAAAGTTTTATACTGAAATTGG
GCAGATGGATGATTCTGTTATCTGTTTCAAAAAGATGGTTCATGCCCGCAAACAAATTCAGAGAGGGGATTGTTTGTATG
AAATTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_8) (259-286)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

• Tetratricopeptide repeat (TPR_12) (187-245)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.421
rapF	Bacillus subtilis subsp. subtilis str. 168	38.786	100	0.392