Detailed information NTG0293252

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: EQI87_RS01655
• Genome accession: NZ_CP035166
• Coordinates: 295403..296524 (+)
• Length: 373 a.a.
• NCBI ID: WP_046380767.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103971
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 290403..301524

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQI87_RS01630 (EQI87_01630)	ycdA	290408..291472 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
EQI87_RS01635 (EQI87_01635)	-	291495..291626 (-)	132	WP_003246334.1	hypothetical protein	-
EQI87_RS01640 (EQI87_01640)	ycdB	291800..293221 (+)	1422	WP_046380765.1	YcdB/YcdC domain-containing protein	-
EQI87_RS01645 (EQI87_01645)	ycdC	293408..294769 (+)	1362	WP_046381483.1	YcdB/YcdC domain-containing protein	-
EQI87_RS01650 (EQI87_01650)	cwlK	294777..295280 (-)	504	WP_046380766.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
EQI87_RS01655 (EQI87_01655)	rapF	295403..296524 (+)	1122	WP_046380767.1	response regulator aspartate phosphatase RapJ	Regulator
EQI87_RS01660 (EQI87_01660)	ycdF	296631..297407 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
EQI87_RS01665 (EQI87_01665)	ycdG	297432..299117 (+)	1686	WP_003234736.1	alpha-glucosidase	-
EQI87_RS01670 (EQI87_01670)	znuA	299305..300264 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
EQI87_RS01675 (EQI87_01675)	znuC	300320..301015 (+)	696	WP_003234730.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44356.17 Da
• Isoelectric Point: 4.8344

>NTDB_id=293252 EQI87_RS01655 WP_046380767.1 295403..296524(+) (rapF) [Bacillus subtilis strain SRCM103971]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDSYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=293252 EQI87_RS01655 WP_046380767.1 295403..296524(+) (rapF) [Bacillus subtilis strain SRCM103971]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACTCGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGTTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405