Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   DK182_RS10470 Genome accession   NZ_CP029491
Coordinates   2144087..2144854 (+) Length   255 a.a.
NCBI ID   WP_109833721.1    Uniprot ID   -
Organism   Streptococcus sobrinus strain 10919     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2139087..2149854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK182_RS10460 (DK181_10460) rlmH 2142144..2142623 (-) 480 WP_019770048.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DK182_RS10465 (DK181_10465) htrA 2142819..2144027 (+) 1209 WP_002960389.1 S1C family serine protease Regulator
  DK182_RS10470 (DK181_10470) spo0J 2144087..2144854 (+) 768 WP_109833721.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29333.82 Da        Isoelectric Point: 10.1127

>NTDB_id=293243 DK182_RS10470 WP_109833721.1 2144087..2144854(+) (spo0J) [Streptococcus sobrinus strain 10919]
MTVELKELKLSDISPNPFQPRLTFKQEELEELADSIKENGLIQPIIVRKSAVFGYELIAGERRFRACQLAQLETIPAIIK
ELSDQDSRIQTIIENLQRSDLNPIEEAKAYRNLIETNRMTHEEIAKYMGKSRPYITNFLRLLNLSAPLQKALEDGSLSSG
HARLLLGMRDQEQEAWLNKIRHNKLSVRELERQSKPRTKQKKAKQTNLFKKDLEENLSRALGLPVNLSMTKKQAGKLTIT
FSSQDDLNRIINKLN

Nucleotide


Download         Length: 768 bp        

>NTDB_id=293243 DK182_RS10470 WP_109833721.1 2144087..2144854(+) (spo0J) [Streptococcus sobrinus strain 10919]
ATGACAGTAGAATTAAAAGAATTGAAATTAAGCGATATCTCACCCAATCCCTTTCAACCCCGCTTAACTTTTAAGCAGGA
GGAGTTGGAGGAGCTGGCCGATTCCATCAAAGAAAACGGCCTGATTCAACCCATTATTGTCCGAAAATCAGCTGTCTTTG
GCTATGAATTGATAGCTGGCGAACGACGTTTTCGAGCCTGCCAATTGGCGCAATTAGAGACTATTCCGGCTATTATCAAA
GAACTTTCAGATCAAGACAGTCGCATTCAGACCATCATTGAAAATTTGCAACGATCTGACCTCAATCCCATTGAGGAGGC
CAAGGCCTACCGAAATCTGATTGAAACCAATCGGATGACCCATGAAGAAATTGCTAAGTACATGGGTAAATCGCGTCCCT
ATATCACTAACTTTTTGCGACTCTTGAATCTATCTGCTCCTTTACAAAAAGCTCTTGAAGACGGCAGCCTATCTTCTGGC
CATGCCCGTCTCCTCTTAGGAATGAGAGACCAAGAACAAGAGGCTTGGCTGAACAAGATTAGACACAATAAGTTGTCTGT
CAGAGAATTAGAAAGACAGTCAAAACCACGGACCAAGCAAAAGAAGGCGAAACAAACCAATCTCTTCAAGAAAGATTTAG
AAGAAAATCTATCAAGAGCTCTCGGCTTGCCGGTCAATCTCTCAATGACCAAAAAGCAGGCTGGCAAGTTGACCATTACC
TTTTCCTCCCAAGATGACTTGAACAGAATTATCAACAAGCTTAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

60.156

100

0.604


Multiple sequence alignment