Detailed information NTG0293196

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DK182_RS00800
• Genome accession: NZ_CP029491
• Coordinates: 130999..131922 (+)
• Length: 307 a.a.
• NCBI ID: WP_002999065.1
• Uniprot ID: -
• Organism: Streptococcus sobrinus strain 10919
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 125999..136922

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK182_RS00775 (DK181_00775)	-	126215..127879 (+)	1665	WP_019790071.1	peptide ABC transporter substrate-binding protein	-
DK182_RS00785 (DK181_00785)	-	127985..128899 (+)	915	WP_019790070.1	ABC transporter permease	-
DK182_RS00790 (DK181_00790)	-	128911..129942 (+)	1032	WP_019769977.1	ABC transporter permease	-
DK182_RS00795 (DK181_00795)	oppD	129953..131002 (+)	1050	WP_019771160.1	ABC transporter ATP-binding protein	Regulator
DK182_RS00800 (DK181_00800)	amiF	130999..131922 (+)	924	WP_002999065.1	ABC transporter ATP-binding protein	Regulator
DK182_RS00805 (DK181_00805)	-	132159..133844 (-)	1686	WP_109833406.1	MFS transporter	-
DK182_RS00810 (DK181_00810)	-	133976..134497 (+)	522	WP_019775299.1	PadR family transcriptional regulator	-
DK182_RS00815 (DK181_00815)	-	134510..134818 (+)	309	WP_019777335.1	LlsX family protein	-
DK182_RS00825 (DK181_00825)	-	135178..135744 (+)	567	WP_019771248.1	TMEM175 family protein	-
DK182_RS10490	-	136098..136241 (-)	144	WP_002959475.1	hypothetical protein	-
DK182_RS00830 (DK181_00830)	-	136231..136521 (-)	291	WP_303660099.1	XRE family transcriptional regulator	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34424.99 Da
• Isoelectric Point: 6.2861

>NTDB_id=293196 DK182_RS00800 WP_002999065.1 130999..131922(+) (amiF) [Streptococcus sobrinus strain 10919]
MTQDRKKLVQVKNVSLTFNRGKSNQVKAIDDVSFDIYEGEVFGLVGESGSGKTTIGRSILKLYDIDGGDISFNGKSVASL
KGKGLHDFRKDAQMIFQDPQASLNGRMTIRDIIAEGLDIHHLTASKEERQRKVEELIELVGLNKDHLSRYPHEFSGGQRQ
RIGIARALAVNPKFIVADEPISALDVSIQAQVVNLMQKLQHDQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGPADE
VYNNPIHPYTKSLLSAIPEPDPESERNRIPQVYDPSLEEDGQARIMHEITSGHFVYATDQEAENYKK

Nucleotide

• Length: 924 bp

>NTDB_id=293196 DK182_RS00800 WP_002999065.1 130999..131922(+) (amiF) [Streptococcus sobrinus strain 10919]
ATGACCCAAGACCGCAAAAAATTAGTCCAAGTCAAGAACGTTTCCCTGACCTTCAATCGGGGGAAATCTAACCAAGTCAA
GGCCATTGACGATGTCAGCTTCGACATCTATGAAGGTGAAGTCTTCGGTCTGGTTGGGGAATCCGGTTCTGGTAAGACCA
CCATTGGTCGCTCCATCCTCAAGCTCTATGATATTGATGGTGGCGACATTAGTTTCAATGGGAAATCTGTCGCCAGCCTC
AAGGGTAAGGGCCTGCACGACTTCCGCAAGGATGCCCAAATGATTTTCCAAGACCCTCAGGCCAGCCTTAATGGTCGGAT
GACCATTCGGGACATTATCGCCGAAGGTTTGGATATTCACCACTTGACCGCCAGTAAGGAAGAGCGGCAGCGGAAGGTGG
AAGAGCTGATCGAATTGGTCGGCCTCAATAAGGACCATCTCTCTCGCTATCCCCATGAATTCTCCGGTGGTCAACGCCAG
CGGATTGGGATTGCCAGAGCCTTGGCCGTTAACCCTAAATTTATCGTGGCCGATGAACCTATCTCTGCCTTGGATGTTTC
CATCCAGGCTCAGGTGGTCAACCTCATGCAAAAACTCCAGCATGACCAAGGCCTGACCTACCTCTTTATCGCCCATGACT
TGTCTATGGTTAAATATATCTCTGATCGGATTGGTGTTATGCACTGGGGCAAGCTCTTAGAAGTAGGACCAGCGGATGAG
GTTTACAATAACCCTATCCACCCCTACACCAAGTCGCTCTTGTCGGCTATTCCAGAGCCGGATCCAGAAAGCGAACGCAA
CCGCATTCCACAGGTTTACGACCCAAGTCTGGAAGAGGATGGCCAAGCCCGTATCATGCACGAAATCACCTCTGGTCACT
TCGTCTATGCGACCGACCAAGAGGCTGAAAATTATAAGAAATAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.605	99.023	0.541
amiF	Streptococcus thermophilus LMG 18311	54.276	99.023	0.537
amiF	Streptococcus salivarius strain HSISS4	53.618	99.023	0.531
oppD	Streptococcus mutans UA159	43.462	84.691	0.368