Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | DK181_RS08135 | Genome accession | NZ_CP029490 |
| Coordinates | 1680319..1682625 (+) | Length | 768 a.a. |
| NCBI ID | WP_028798570.1 | Uniprot ID | - |
| Organism | Streptococcus sobrinus strain SL1 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1675319..1687625
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK181_RS08110 (DK182_08110) | - | 1675965..1676657 (-) | 693 | WP_002962880.1 | amino acid ABC transporter permease | - |
| DK181_RS08115 (DK182_08115) | - | 1676925..1677878 (+) | 954 | WP_109821383.1 | IS30 family transposase | - |
| DK181_RS08120 (DK182_08120) | - | 1678022..1678612 (-) | 591 | WP_002960315.1 | hypothetical protein | - |
| DK181_RS08125 (DK182_08125) | - | 1678675..1678905 (-) | 231 | WP_002960316.1 | DUF1797 family protein | - |
| DK181_RS08130 (DK182_08130) | argF | 1679128..1680102 (-) | 975 | WP_002960317.1 | ornithine carbamoyltransferase | - |
| DK181_RS08135 (DK182_08135) | clpE | 1680319..1682625 (+) | 2307 | WP_028798570.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| DK181_RS08140 (DK182_08140) | - | 1683220..1683672 (+) | 453 | WP_002963345.1 | NUDIX hydrolase | - |
| DK181_RS08145 (DK182_08145) | - | 1683738..1684040 (+) | 303 | WP_002963344.1 | DUF1827 family protein | - |
| DK181_RS08150 (DK182_08150) | ileS | 1684155..1686950 (-) | 2796 | WP_002963343.1 | isoleucine--tRNA ligase | - |
Sequence
Protein
Download Length: 768 a.a. Molecular weight: 85274.22 Da Isoelectric Point: 4.9372
>NTDB_id=293173 DK181_RS08135 WP_028798570.1 1680319..1682625(+) (clpE) [Streptococcus sobrinus strain SL1]
MLCQNCKLNDASIHLYANINGQQKQIDLCQNCYQIMKADPENILSSNLTSQNPQSHQNQSMDSFFDDFFGDLNNFRAFNP
DLPNAPQSQAGRNGGDGGNRGGNNGGGNQGRRAQAQPQQAQGILDEFGINITDMARRGDIDPVIGRDQEIVRVIEILNRR
TKNNPVLIGEPGVGKTAVVEGLAQKIVDGSVPQKLQNKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRQRQDVILFID
EIHEIVGAGGTSDGSMDAGNILKPALARGDLQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILHGIQPKYQ
DYHHVKYTDDAIEAAAVLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFIDPKEIDQRLVEAENLKAQATREEDFEKAAY
FRDQIAKYKEMQSQQLDDQDIPVITEKHIEAIVEEKTNIPVGDLKEKEQSQLVNLADDLKSRVIGQDDAVDKIAKAIRRN
RVGLGAPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVR
RNPYSLTLLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKSEASVGFGAAREGRTNSVMGELS
NFFSPEFMNRFDGIIEFKALSKDNLLHIVDLMLDDVNKRLSSNDLHLDVTDKVKEKLVELGYDPKMGARPLRRTIQDNIE
DAITDFYLENPSEKNFKAVMTSNGKISIKAAKKAETSVAGKKERSSEN
MLCQNCKLNDASIHLYANINGQQKQIDLCQNCYQIMKADPENILSSNLTSQNPQSHQNQSMDSFFDDFFGDLNNFRAFNP
DLPNAPQSQAGRNGGDGGNRGGNNGGGNQGRRAQAQPQQAQGILDEFGINITDMARRGDIDPVIGRDQEIVRVIEILNRR
TKNNPVLIGEPGVGKTAVVEGLAQKIVDGSVPQKLQNKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRQRQDVILFID
EIHEIVGAGGTSDGSMDAGNILKPALARGDLQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILHGIQPKYQ
DYHHVKYTDDAIEAAAVLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFIDPKEIDQRLVEAENLKAQATREEDFEKAAY
FRDQIAKYKEMQSQQLDDQDIPVITEKHIEAIVEEKTNIPVGDLKEKEQSQLVNLADDLKSRVIGQDDAVDKIAKAIRRN
RVGLGAPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVR
RNPYSLTLLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKSEASVGFGAAREGRTNSVMGELS
NFFSPEFMNRFDGIIEFKALSKDNLLHIVDLMLDDVNKRLSSNDLHLDVTDKVKEKLVELGYDPKMGARPLRRTIQDNIE
DAITDFYLENPSEKNFKAVMTSNGKISIKAAKKAETSVAGKKERSSEN
Nucleotide
Download Length: 2307 bp
>NTDB_id=293173 DK181_RS08135 WP_028798570.1 1680319..1682625(+) (clpE) [Streptococcus sobrinus strain SL1]
ATGTTATGTCAAAACTGTAAGCTCAACGATGCGAGCATACATCTCTATGCAAATATTAATGGCCAGCAAAAGCAGATTGA
TCTCTGTCAAAACTGCTATCAAATCATGAAGGCTGACCCAGAAAATATTCTCAGTAGTAATTTAACCAGCCAAAATCCAC
AAAGTCATCAAAATCAATCTATGGATTCATTCTTTGATGATTTCTTTGGTGATTTAAACAATTTCCGTGCTTTTAATCCA
GATCTACCTAACGCTCCCCAATCACAAGCGGGACGCAATGGTGGTGACGGGGGTAATCGTGGCGGCAATAACGGTGGAGG
TAATCAAGGTCGCAGAGCTCAGGCTCAGCCCCAACAAGCTCAAGGTATCTTGGATGAGTTCGGGATCAACATTACTGATA
TGGCCCGCCGGGGTGACATTGACCCTGTTATCGGTCGTGACCAAGAAATTGTCCGCGTCATTGAAATTCTCAACCGTCGG
ACCAAGAACAACCCTGTCCTCATCGGTGAACCTGGTGTTGGTAAAACAGCTGTTGTTGAAGGCTTGGCTCAAAAGATTGT
CGATGGTAGTGTCCCTCAAAAATTACAGAACAAACAAGTCATTCGTTTAGATGTGGTCAGCCTAGTCCAAGGCACCGGTA
TTCGAGGACAGTTTGAAGAACGGATGCAAAAGCTGATGGAAGAAATTCGCCAGCGGCAAGATGTCATCCTCTTTATCGAC
GAAATCCATGAAATCGTTGGTGCTGGTGGCACTTCTGACGGTAGCATGGATGCCGGAAATATCCTCAAGCCAGCCCTGGC
CCGTGGTGACCTACAGCTGGTTGGTGCCACTACTCTCAATGAATATCGGATTATTGAAAAAGATGCGGCTCTAGAAAGAC
GGATGCAACCAGTCAAGGTGGATGAACCTTCCGTTGAAGAAACCATCACCATCCTGCATGGTATCCAACCCAAGTATCAA
GACTACCATCATGTCAAATATACTGATGATGCCATCGAGGCTGCGGCTGTCCTGTCCAACCGCTACATTCAAGACCGCTT
CCTGCCAGATAAGGCCATTGACCTTCTGGACGAAGCCGGCTCCAAGATGAATTTGACCCTTAACTTTATTGATCCTAAGG
AAATTGACCAACGCTTGGTTGAGGCCGAAAATCTCAAGGCTCAAGCGACTCGCGAAGAGGACTTTGAAAAAGCCGCCTAC
TTCCGCGACCAAATTGCCAAGTACAAGGAAATGCAGTCCCAACAACTGGATGACCAAGATATTCCTGTTATCACAGAAAA
GCATATCGAAGCCATCGTTGAAGAAAAGACCAATATTCCTGTCGGTGATTTGAAGGAAAAGGAACAGTCGCAACTGGTCA
ACTTGGCAGATGACCTCAAGTCCCGTGTCATTGGTCAGGACGATGCTGTCGATAAGATTGCCAAGGCCATCCGCCGTAAT
CGTGTCGGTCTGGGGGCTCCAAATCGTCCAATCGGTAGCTTCCTCTTTGTTGGACCTACCGGTGTCGGTAAGACTGAGCT
GTCCAAACAGCTGGCCATTGAGCTCTTCGGCTCGGCTGACAGCATGATTCGTTTCGACATGTCCGAATACATGGAAAAAC
ATGCCGTAGCCAAACTCGTTGGAGCCCCTCCAGGTTATGTGGGCTACGAAGAAGCTGGCCAATTAACTGAAAAAGTTCGT
CGCAACCCTTATTCCCTTACCCTGCTGGATGAAGTGGAAAAGGCCCATCCTGATGTCATGCACATGTTCCTGCAAGTCTT
GGATGATGGTCGCCTGACCGATGGTCAAGGTCGGACCGTCAGCTTCAAGGATACCATCATTATCATGACCTCAAATGCTG
GTACTGGTAAGTCTGAGGCTTCCGTTGGTTTCGGAGCCGCCCGTGAAGGGCGGACCAATTCCGTCATGGGAGAATTGAGC
AACTTCTTCAGTCCAGAATTCATGAACCGTTTCGATGGTATTATTGAATTCAAGGCCCTGAGCAAGGACAACCTTCTCCA
TATCGTGGATCTCATGTTGGATGATGTCAACAAGCGTTTGTCCAGCAATGACCTTCACCTGGATGTCACCGATAAGGTCA
AGGAAAAATTAGTTGAACTGGGTTATGATCCCAAGATGGGGGCAAGACCTCTGCGTCGAACCATCCAAGATAATATCGAA
GATGCCATTACCGACTTCTACCTAGAAAATCCTAGTGAAAAGAACTTCAAGGCCGTTATGACTTCGAATGGTAAGATCAG
CATCAAGGCTGCCAAAAAGGCCGAGACGAGTGTCGCAGGTAAAAAAGAAAGGTCGTCTGAAAATTAG
ATGTTATGTCAAAACTGTAAGCTCAACGATGCGAGCATACATCTCTATGCAAATATTAATGGCCAGCAAAAGCAGATTGA
TCTCTGTCAAAACTGCTATCAAATCATGAAGGCTGACCCAGAAAATATTCTCAGTAGTAATTTAACCAGCCAAAATCCAC
AAAGTCATCAAAATCAATCTATGGATTCATTCTTTGATGATTTCTTTGGTGATTTAAACAATTTCCGTGCTTTTAATCCA
GATCTACCTAACGCTCCCCAATCACAAGCGGGACGCAATGGTGGTGACGGGGGTAATCGTGGCGGCAATAACGGTGGAGG
TAATCAAGGTCGCAGAGCTCAGGCTCAGCCCCAACAAGCTCAAGGTATCTTGGATGAGTTCGGGATCAACATTACTGATA
TGGCCCGCCGGGGTGACATTGACCCTGTTATCGGTCGTGACCAAGAAATTGTCCGCGTCATTGAAATTCTCAACCGTCGG
ACCAAGAACAACCCTGTCCTCATCGGTGAACCTGGTGTTGGTAAAACAGCTGTTGTTGAAGGCTTGGCTCAAAAGATTGT
CGATGGTAGTGTCCCTCAAAAATTACAGAACAAACAAGTCATTCGTTTAGATGTGGTCAGCCTAGTCCAAGGCACCGGTA
TTCGAGGACAGTTTGAAGAACGGATGCAAAAGCTGATGGAAGAAATTCGCCAGCGGCAAGATGTCATCCTCTTTATCGAC
GAAATCCATGAAATCGTTGGTGCTGGTGGCACTTCTGACGGTAGCATGGATGCCGGAAATATCCTCAAGCCAGCCCTGGC
CCGTGGTGACCTACAGCTGGTTGGTGCCACTACTCTCAATGAATATCGGATTATTGAAAAAGATGCGGCTCTAGAAAGAC
GGATGCAACCAGTCAAGGTGGATGAACCTTCCGTTGAAGAAACCATCACCATCCTGCATGGTATCCAACCCAAGTATCAA
GACTACCATCATGTCAAATATACTGATGATGCCATCGAGGCTGCGGCTGTCCTGTCCAACCGCTACATTCAAGACCGCTT
CCTGCCAGATAAGGCCATTGACCTTCTGGACGAAGCCGGCTCCAAGATGAATTTGACCCTTAACTTTATTGATCCTAAGG
AAATTGACCAACGCTTGGTTGAGGCCGAAAATCTCAAGGCTCAAGCGACTCGCGAAGAGGACTTTGAAAAAGCCGCCTAC
TTCCGCGACCAAATTGCCAAGTACAAGGAAATGCAGTCCCAACAACTGGATGACCAAGATATTCCTGTTATCACAGAAAA
GCATATCGAAGCCATCGTTGAAGAAAAGACCAATATTCCTGTCGGTGATTTGAAGGAAAAGGAACAGTCGCAACTGGTCA
ACTTGGCAGATGACCTCAAGTCCCGTGTCATTGGTCAGGACGATGCTGTCGATAAGATTGCCAAGGCCATCCGCCGTAAT
CGTGTCGGTCTGGGGGCTCCAAATCGTCCAATCGGTAGCTTCCTCTTTGTTGGACCTACCGGTGTCGGTAAGACTGAGCT
GTCCAAACAGCTGGCCATTGAGCTCTTCGGCTCGGCTGACAGCATGATTCGTTTCGACATGTCCGAATACATGGAAAAAC
ATGCCGTAGCCAAACTCGTTGGAGCCCCTCCAGGTTATGTGGGCTACGAAGAAGCTGGCCAATTAACTGAAAAAGTTCGT
CGCAACCCTTATTCCCTTACCCTGCTGGATGAAGTGGAAAAGGCCCATCCTGATGTCATGCACATGTTCCTGCAAGTCTT
GGATGATGGTCGCCTGACCGATGGTCAAGGTCGGACCGTCAGCTTCAAGGATACCATCATTATCATGACCTCAAATGCTG
GTACTGGTAAGTCTGAGGCTTCCGTTGGTTTCGGAGCCGCCCGTGAAGGGCGGACCAATTCCGTCATGGGAGAATTGAGC
AACTTCTTCAGTCCAGAATTCATGAACCGTTTCGATGGTATTATTGAATTCAAGGCCCTGAGCAAGGACAACCTTCTCCA
TATCGTGGATCTCATGTTGGATGATGTCAACAAGCGTTTGTCCAGCAATGACCTTCACCTGGATGTCACCGATAAGGTCA
AGGAAAAATTAGTTGAACTGGGTTATGATCCCAAGATGGGGGCAAGACCTCTGCGTCGAACCATCCAAGATAATATCGAA
GATGCCATTACCGACTTCTACCTAGAAAATCCTAGTGAAAAGAACTTCAAGGCCGTTATGACTTCGAATGGTAAGATCAG
CATCAAGGCTGCCAAAAAGGCCGAGACGAGTGTCGCAGGTAAAAAAGAAAGGTCGTCTGAAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
84.016 |
98.568 |
0.828 |
| clpE | Streptococcus pneumoniae Rx1 |
81.651 |
99.349 |
0.811 |
| clpE | Streptococcus pneumoniae D39 |
81.651 |
99.349 |
0.811 |
| clpE | Streptococcus pneumoniae R6 |
81.651 |
99.349 |
0.811 |
| clpE | Streptococcus pneumoniae TIGR4 |
81.651 |
99.349 |
0.811 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
73.587 |
99.089 |
0.729 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
53.313 |
84.505 |
0.451 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.994 |
84.375 |
0.405 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.142 |
84.375 |
0.389 |
| clpC | Streptococcus pneumoniae Rx1 |
46.88 |
81.38 |
0.382 |
| clpC | Streptococcus pneumoniae D39 |
46.88 |
81.38 |
0.382 |
| clpC | Streptococcus thermophilus LMD-9 |
46.87 |
81.12 |
0.38 |
| clpC | Streptococcus mutans UA159 |
46.635 |
81.25 |
0.379 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.302 |
80.99 |
0.375 |