Detailed information
Bioinformatically predicted
Overview
| Name | comX | Type | Regulator |
| Locus tag | DK181_RS00520 | Genome accession | NZ_CP029490 |
| Coordinates | 82712..83335 (+) | Length | 207 a.a. |
| NCBI ID | WP_002962720.1 | Uniprot ID | U2IUC9 |
| Organism | Streptococcus sobrinus strain SL1 | ||
| Function | activation of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 77712..88335
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK181_RS00520 (DK182_00520) | comX | 82712..83335 (+) | 624 | WP_002962720.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
| DK181_RS00525 (DK182_00525) | rplM | 83632..84078 (+) | 447 | WP_002962718.1 | 50S ribosomal protein L13 | - |
| DK181_RS00530 (DK182_00530) | rpsI | 84098..84490 (+) | 393 | WP_019769825.1 | 30S ribosomal protein S9 | - |
| DK181_RS00535 (DK182_00535) | ruvB | 84765..85763 (+) | 999 | WP_002962715.1 | Holliday junction branch migration DNA helicase RuvB | - |
| DK181_RS00540 (DK182_00540) | - | 85808..86233 (+) | 426 | WP_002962714.1 | low molecular weight protein-tyrosine-phosphatase | - |
| DK181_RS00545 (DK182_00545) | - | 86212..86646 (+) | 435 | WP_002962711.1 | MORN repeat-containing protein | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 24561.19 Da Isoelectric Point: 4.8066
>NTDB_id=293138 DK181_RS00520 WP_002962720.1 82712..83335(+) (comX) [Streptococcus sobrinus strain SL1]
MDKEKLKEIFNKHSALPEEVEEFDDGMVKEVITAGLLFCLKEVLDMDDSSFVSAFSRVEKTVSKLAKDYYIKLWTYDDWR
QEARIILYQLLERFPDLANDEEKLRIYFKTKFRSYVLDNIRKQESQKRAFDRMIYEEISELGHMIPSQQMDTADYCALKE
KLKELKQKLAPEDYAKILLLMRGGAFKGRSAFIKDIKVEFEDFDEDN
MDKEKLKEIFNKHSALPEEVEEFDDGMVKEVITAGLLFCLKEVLDMDDSSFVSAFSRVEKTVSKLAKDYYIKLWTYDDWR
QEARIILYQLLERFPDLANDEEKLRIYFKTKFRSYVLDNIRKQESQKRAFDRMIYEEISELGHMIPSQQMDTADYCALKE
KLKELKQKLAPEDYAKILLLMRGGAFKGRSAFIKDIKVEFEDFDEDN
Nucleotide
Download Length: 624 bp
>NTDB_id=293138 DK181_RS00520 WP_002962720.1 82712..83335(+) (comX) [Streptococcus sobrinus strain SL1]
ATGGACAAAGAAAAACTCAAGGAAATTTTTAACAAACATTCTGCCTTACCAGAAGAAGTTGAAGAGTTTGATGATGGTAT
GGTCAAAGAAGTCATTACCGCTGGTTTATTATTTTGTTTGAAAGAGGTATTGGATATGGATGATTCTTCATTTGTAAGTG
CATTTAGCCGTGTTGAAAAGACTGTTAGCAAACTAGCTAAAGATTATTATATTAAATTATGGACCTATGATGACTGGAGG
CAGGAGGCACGAATTATCCTTTATCAGTTATTGGAGCGATTTCCAGATTTGGCCAATGATGAAGAAAAGTTACGAATCTA
TTTTAAAACAAAGTTCAGAAGTTATGTCCTTGATAATATTCGCAAGCAGGAAAGTCAAAAACGCGCTTTTGACAGGATGA
TTTACGAGGAAATTTCTGAATTAGGTCATATGATTCCTAGTCAGCAGATGGACACAGCTGATTATTGTGCCCTTAAGGAA
AAGCTAAAGGAACTTAAGCAGAAATTGGCTCCTGAGGATTATGCCAAAATTCTATTGCTGATGCGAGGTGGTGCATTCAA
AGGGAGAAGTGCCTTTATCAAGGATATTAAGGTTGAATTCGAAGATTTTGACGAGGACAACTAA
ATGGACAAAGAAAAACTCAAGGAAATTTTTAACAAACATTCTGCCTTACCAGAAGAAGTTGAAGAGTTTGATGATGGTAT
GGTCAAAGAAGTCATTACCGCTGGTTTATTATTTTGTTTGAAAGAGGTATTGGATATGGATGATTCTTCATTTGTAAGTG
CATTTAGCCGTGTTGAAAAGACTGTTAGCAAACTAGCTAAAGATTATTATATTAAATTATGGACCTATGATGACTGGAGG
CAGGAGGCACGAATTATCCTTTATCAGTTATTGGAGCGATTTCCAGATTTGGCCAATGATGAAGAAAAGTTACGAATCTA
TTTTAAAACAAAGTTCAGAAGTTATGTCCTTGATAATATTCGCAAGCAGGAAAGTCAAAAACGCGCTTTTGACAGGATGA
TTTACGAGGAAATTTCTGAATTAGGTCATATGATTCCTAGTCAGCAGATGGACACAGCTGATTATTGTGCCCTTAAGGAA
AAGCTAAAGGAACTTAAGCAGAAATTGGCTCCTGAGGATTATGCCAAAATTCTATTGCTGATGCGAGGTGGTGCATTCAA
AGGGAGAAGTGCCTTTATCAAGGATATTAAGGTTGAATTCGAAGATTTTGACGAGGACAACTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX | Streptococcus sobrinus strain NIDR 6715-7 |
100 |
100 |
1 |