Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DJ564_RS30625 Genome accession   NZ_CP029482
Coordinates   6471702..6472106 (-) Length   134 a.a.
NCBI ID   WP_010466861.1    Uniprot ID   -
Organism   Pseudomonas sp. 31-12     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6466702..6477106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DJ564_RS30610 (DJ564_30610) - 6468517..6470574 (-) 2058 WP_109635575.1 methyl-accepting chemotaxis protein -
  DJ564_RS30615 (DJ564_30615) - 6470729..6471268 (-) 540 WP_109635577.1 chemotaxis protein CheW -
  DJ564_RS30620 (DJ564_30620) pilH 6471279..6471644 (-) 366 WP_109635579.1 twitching motility response regulator PilH -
  DJ564_RS30625 (DJ564_30625) pilG 6471702..6472106 (-) 405 WP_010466861.1 twitching motility response regulator PilG Regulator
  DJ564_RS30630 (DJ564_30630) gshB 6472341..6473294 (+) 954 WP_109635581.1 glutathione synthase -
  DJ564_RS30635 (DJ564_30635) - 6473372..6474271 (+) 900 WP_109635582.1 energy transducer TonB -
  DJ564_RS30640 (DJ564_30640) - 6474514..6475086 (+) 573 WP_109635583.1 YqgE/AlgH family protein -
  DJ564_RS30645 (DJ564_30645) ruvX 6475086..6475523 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  DJ564_RS30650 (DJ564_30650) pyrR 6475615..6476118 (+) 504 WP_109635584.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14613.03 Da        Isoelectric Point: 7.3230

>NTDB_id=293101 DJ564_RS30625 WP_010466861.1 6471702..6472106(-) (pilG) [Pseudomonas sp. 31-12]
MEQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNHSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=293101 DJ564_RS30625 WP_010466861.1 6471702..6472106(-) (pilG) [Pseudomonas sp. 31-12]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTGATCGATGATTCGAAGACGATTCGCCGCACCGCCGAAACGCTGTT
GAAGAACGTGGGGTGTGAAGTCATCACGGCCATCGATGGTTTCGATGCCCTGGCGAAGATTGCCGACAATCACCCCGGCA
TCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCGCTGATCAAGAACCACAGTGCGTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATTGTCGGCTCCGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAACGCGATCCAGGCCCATGTACCGGGTTTCGCCGCCGTTTTGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709

Multiple sequence alignment