Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   B7L90_RS20025 Genome accession   NZ_CP029473
Coordinates   1587735..1587899 (-) Length   54 a.a.
NCBI ID   WP_269465305.1    Uniprot ID   -
Organism   Bacillus velezensis strain Hx05     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1582735..1592899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7L90_RS20025 comS 1587735..1587899 (-) 165 WP_269465305.1 competence protein ComS Regulator
  B7L90_RS20030 srfAB 1587964..1591008 (-) 3045 Protein_1475 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6264.26 Da        Isoelectric Point: 11.7559

>NTDB_id=292973 B7L90_RS20025 WP_269465305.1 1587735..1587899(-) (comS) [Bacillus velezensis strain Hx05]
MRPRRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=292973 B7L90_RS20025 WP_269465305.1 1587735..1587899(-) (comS) [Bacillus velezensis strain Hx05]
ATGAGACCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5

Multiple sequence alignment