Detailed information NTG0292934

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: B7L90_RS09420
• Genome accession: NZ_CP029473
• Coordinates: 1922895..1924007 (-)
• Length: 370 a.a.
• NCBI ID: WP_024084783.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Hx05
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1917895..1929007

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B7L90_RS09405 (B7L90_18800)	gyrA	1917981..1920440 (-)	2460	WP_004392898.1	DNA gyrase subunit A	-
B7L90_RS09410 (B7L90_18795)	gyrB	1920656..1922572 (-)	1917	WP_004392900.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
B7L90_RS09415 (B7L90_18790)	-	1922632..1922877 (-)	246	WP_004392908.1	extracellular matrix/biofilm biosynthesis regulator RemA family protein	-
B7L90_RS09420 (B7L90_18785)	recF	1922895..1924007 (-)	1113	WP_024084783.1	DNA replication/repair protein RecF	Machinery gene
B7L90_RS09425 (B7L90_18780)	rlbA	1924023..1924238 (-)	216	WP_004392910.1	ribosome maturation protein RlbA	-
B7L90_RS09430 (B7L90_18775)	dnaN	1924373..1925509 (-)	1137	WP_004392911.1	DNA polymerase III subunit beta	-
B7L90_RS09435 (B7L90_18770)	dnaA	1925694..1927034 (-)	1341	WP_004392913.1	chromosomal replication initiator protein DnaA	-
B7L90_RS09440 (B7L90_18765)	rpmH	1927656..1927790 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
B7L90_RS09445 (B7L90_18760)	rnpA	1927945..1928295 (+)	351	WP_004392944.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42428.35 Da
• Isoelectric Point: 7.0882

>NTDB_id=292934 B7L90_RS09420 WP_024084783.1 1922895..1924007(-) (recF) [Bacillus velezensis strain Hx05]
MYIQNLELTSYRNYERAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDEDYAKIEGRVMKRNGD
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSAVYLYDLSLYQKILSQR
NHFLKQLQSRKQTDRTMLDVLTDQLIEAAAKVVARRLQFTAQLEKWAQPIHSGISRGLEELTLKYHTALDVSDPKDLSKI
GNSYQESFSKLKEKEIERGVTLFGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHDTLHQAGMFRVENGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=292934 B7L90_RS09420 WP_024084783.1 1922895..1924007(-) (recF) [Bacillus velezensis strain Hx05]
TTGTATATCCAAAATTTAGAATTAACATCCTACCGTAATTATGAGCGCGCTGAGCTTCAATTCGAAAACAAGGTGAATGT
GATCATCGGGGAAAATGCCCAGGGCAAAACCAATCTGATGGAAGCCATCTATGTCCTTTCGATGGCAAAATCACACCGCA
CCTCAAATGACAAAGAACTTATACGGTGGGACGAAGACTATGCTAAAATAGAAGGAAGAGTGATGAAGCGCAACGGGGAC
ATCCCGATGCAGCTTGTCATCTCCAAAAAAGGTAAAAAGGGCAAGGTCAATCATATAGAGCAGCAAAAACTCAGTCAGTA
TGTCGGAGCGCTGAACACCATTATGTTTGCCCCTGAGGATTTAAATCTCGTCAAAGGAAGCCCTCAGGTGAGGAGAAGAT
TTCTCGATATGGAGATCGGGCAGGTTTCTGCCGTTTATCTGTATGATTTATCTCTTTATCAAAAAATCCTTTCACAGCGG
AATCATTTTCTGAAACAGCTGCAAAGCCGGAAACAGACTGACCGGACCATGCTTGACGTTCTCACTGATCAGCTGATTGA
AGCAGCCGCAAAAGTTGTCGCCAGACGTCTGCAGTTTACGGCGCAGCTTGAAAAATGGGCGCAGCCGATCCATTCCGGCA
TTTCCCGGGGACTTGAAGAACTGACGCTTAAGTATCACACGGCGCTTGATGTATCAGATCCCAAAGATTTGTCGAAAATA
GGTAACAGCTACCAGGAATCTTTTTCGAAATTAAAAGAAAAAGAAATAGAACGAGGCGTCACATTATTCGGACCGCATCG
GGATGATGTCCTTTTTTATGTGAACGGACGCGATGTGCAGACTTACGGTTCGCAGGGACAGCAGCGTACGACGGCTTTGT
CTCTGAAGCTGGCTGAAATAGATTTGATTCATGAAGAAATCGGAGAATACCCCATTTTACTTTTGGATGATGTACTAAGC
GAGCTGGATGATTACCGACAGTCCCATTTGCTTCATACGATCCAAGGCCGTGTGCAGACATTTGTCACCACGACGAGCGT
GGATGGCATTGACCACGATACCTTACATCAAGCAGGAATGTTCCGTGTGGAAAACGGTGCTTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-346)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	94.324	100	0.943