Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   B7L90_RS07670 Genome accession   NZ_CP029473
Coordinates   1604515..1604952 (+) Length   145 a.a.
NCBI ID   WP_003156588.1    Uniprot ID   -
Organism   Bacillus velezensis strain Hx05     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1599515..1609952
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7L90_RS07655 (B7L90_00800) - 1602373..1602735 (-) 363 WP_014304320.1 helix-turn-helix domain-containing protein -
  B7L90_RS07660 (B7L90_00795) hxlA 1602967..1603602 (+) 636 WP_014304319.1 3-hexulose-6-phosphate synthase -
  B7L90_RS07665 (B7L90_00790) hxlB 1603599..1604156 (+) 558 WP_014304318.1 6-phospho-3-hexuloisomerase -
  B7L90_RS07670 (B7L90_00785) nucA/comI 1604515..1604952 (+) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  B7L90_RS07675 (B7L90_00780) nin/comJ 1604974..1605372 (+) 399 WP_014304317.1 competence protein ComJ Regulator
  B7L90_RS07680 (B7L90_00775) - 1605439..1605609 (-) 171 WP_015388717.1 family 1 glycosylhydrolase -
  B7L90_RS19790 - 1605630..1605746 (-) 117 WP_015388718.1 family 1 glycosylhydrolase -
  B7L90_RS07690 (B7L90_00765) - 1605850..1606170 (-) 321 WP_015388719.1 YckD family protein -
  B7L90_RS07695 (B7L90_00760) - 1606243..1606677 (-) 435 WP_003156592.1 RDD family protein -
  B7L90_RS07700 (B7L90_00755) - 1606692..1607828 (-) 1137 WP_003156594.1 zinc-dependent alcohol dehydrogenase -
  B7L90_RS07705 (B7L90_00750) - 1607893..1609095 (-) 1203 WP_025853783.1 GTP-binding protein -
  B7L90_RS20035 (B7L90_00745) - 1609248..1609373 (+) 126 Protein_1488 hypothetical protein -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16072.35 Da        Isoelectric Point: 8.4850

>NTDB_id=292927 B7L90_RS07670 WP_003156588.1 1604515..1604952(+) (nucA/comI) [Bacillus velezensis strain Hx05]
MKTLKALLLVLIIIAGAVAALIKGDLFSDNEQTVQKSDYDKVILFPSDRYPETAKHIKDAIKEGHSSICTIDRDGVHKRR
EQSLKHVPVKTGYDRDEWPMAVCKQGGNNASVEYISPADNRGAGSWVGHQLTNDPDGTRVLFKIK

Nucleotide


Download         Length: 438 bp        

>NTDB_id=292927 B7L90_RS07670 WP_003156588.1 1604515..1604952(+) (nucA/comI) [Bacillus velezensis strain Hx05]
TTGAAAACATTAAAAGCACTGCTGCTTGTTCTTATCATCATTGCCGGAGCAGTCGCGGCCCTGATCAAGGGTGATCTTTT
CTCAGATAACGAGCAGACCGTTCAGAAGAGTGATTACGACAAAGTAATCCTATTTCCGTCCGATCGATATCCGGAAACAG
CAAAGCATATTAAGGACGCGATAAAAGAAGGGCATTCCAGCATATGCACCATTGACAGAGACGGAGTACATAAGCGGCGT
GAGCAATCTCTTAAACATGTGCCTGTCAAAACGGGATACGATAGGGATGAATGGCCGATGGCGGTTTGTAAACAGGGCGG
AAACAATGCCTCCGTAGAATATATTTCTCCGGCAGACAACCGCGGAGCCGGCTCTTGGGTCGGACACCAGCTTACCAATG
ATCCCGACGGAACGAGAGTATTATTTAAAATCAAGTAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(49-131)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

73.81

86.897

0.641

Multiple sequence alignment