Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   DKG76_RS22135 Genome accession   NZ_CP029465
Coordinates   383992..384132 (+) Length   46 a.a.
NCBI ID   WP_225516634.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain KCTC 13429     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 378992..389132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DKG76_RS22130 srfAB 380856..383948 (+) 3093 Protein_346 surfactin non-ribosomal peptide synthetase SrfAB -
  DKG76_RS22135 comS 383992..384132 (+) 141 WP_225516634.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5274.07 Da        Isoelectric Point: 9.2422

>NTDB_id=292774 DKG76_RS22135 WP_225516634.1 383992..384132(+) (comS) [Bacillus inaquosorum strain KCTC 13429]
MNRSSKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=292774 DKG76_RS22135 WP_225516634.1 383992..384132(+) (comS) [Bacillus inaquosorum strain KCTC 13429]
TTGAACCGATCAAGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTTTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment