Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BPUM_RS06780 | Genome accession | NC_009848 |
| Coordinates | 1399005..1399283 (+) | Length | 92 a.a. |
| NCBI ID | WP_012009813.1 | Uniprot ID | A8FCR0 |
| Organism | Bacillus pumilus SAFR-032 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1394005..1404283
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BPUM_RS06765 (BPUM_1339) | - | 1394321..1395940 (+) | 1620 | WP_012009809.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| BPUM_RS06770 (BPUM_1341) | - | 1396177..1397409 (-) | 1233 | WP_012009811.1 | aminopeptidase | - |
| BPUM_RS19095 (BPUM_1342) | - | 1397516..1397647 (-) | 132 | WP_003210922.1 | protein YkpC | - |
| BPUM_RS06775 (BPUM_1343) | mreBH | 1397722..1398729 (-) | 1008 | WP_012009812.1 | rod-share determining protein MreBH | - |
| BPUM_RS06780 (BPUM_1344) | abrB | 1399005..1399283 (+) | 279 | WP_012009813.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| BPUM_RS06785 (BPUM_1345) | - | 1399426..1400736 (+) | 1311 | WP_041815475.1 | ATP-binding protein | - |
| BPUM_RS06790 (BPUM_1346) | - | 1400741..1401577 (+) | 837 | WP_012009815.1 | gamma-glutamylcyclotransferase | - |
| BPUM_RS06795 (BPUM_1347) | - | 1401615..1402283 (+) | 669 | WP_012009816.1 | potassium channel family protein | - |
| BPUM_RS06800 (BPUM_1348) | ade | 1402546..1404276 (+) | 1731 | WP_012009817.1 | adenine deaminase | - |
Sequence
Protein
Download Length: 92 a.a. Molecular weight: 10291.94 Da Isoelectric Point: 4.5216
>NTDB_id=29276 BPUM_RS06780 WP_012009813.1 1399005..1399283(+) (abrB) [Bacillus pumilus SAFR-032]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSMEFFIDGDKIVLKKYQPEGVCLMTGEITSENHDYGNGQITLSAEGAE
LLLKELQEALQQ
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSMEFFIDGDKIVLKKYQPEGVCLMTGEITSENHDYGNGQITLSAEGAE
LLLKELQEALQQ
Nucleotide
Download Length: 279 bp
>NTDB_id=29276 BPUM_RS06780 WP_012009813.1 1399005..1399283(+) (abrB) [Bacillus pumilus SAFR-032]
TTGAAATCTATCGGAGTCGTAAGAAAAGTAGACGAACTAGGGCGTATTGTGATGCCAATCGAATTAAGAAGAGCACTTGA
TATTGCTATTAAAGACAGTATGGAATTTTTTATAGATGGGGATAAAATTGTCTTGAAAAAATACCAGCCAGAAGGTGTTT
GCCTCATGACTGGTGAGATTACATCAGAGAACCATGATTATGGTAATGGTCAAATTACATTAAGCGCTGAAGGCGCAGAA
CTACTGTTAAAAGAACTTCAAGAAGCTCTTCAGCAGTAA
TTGAAATCTATCGGAGTCGTAAGAAAAGTAGACGAACTAGGGCGTATTGTGATGCCAATCGAATTAAGAAGAGCACTTGA
TATTGCTATTAAAGACAGTATGGAATTTTTTATAGATGGGGATAAAATTGTCTTGAAAAAATACCAGCCAGAAGGTGTTT
GCCTCATGACTGGTGAGATTACATCAGAGAACCATGATTATGGTAATGGTCAAATTACATTAAGCGCTGAAGGCGCAGAA
CTACTGTTAAAAGAACTTCAAGAAGCTCTTCAGCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
54.348 |
100 |
0.543 |