Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   DKG76_RS14755 Genome accession   NZ_CP029465
Coordinates   2951684..2952430 (-) Length   248 a.a.
NCBI ID   WP_003237582.1    Uniprot ID   A0A9W5LKA2
Organism   Bacillus inaquosorum strain KCTC 13429     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2946684..2957430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DKG76_RS14730 (DKG76_14730) mreC 2947091..2947963 (-) 873 WP_003237571.1 rod shape-determining protein MreC -
  DKG76_RS14735 (DKG76_14735) mreB 2947994..2949007 (-) 1014 WP_003237574.1 cell shape-determining protein MreB -
  DKG76_RS14740 (DKG76_14740) radC 2949099..2949794 (-) 696 WP_003237576.1 DNA repair protein RadC -
  DKG76_RS14745 (DKG76_14745) - 2949831..2950400 (-) 570 WP_003237578.1 Maf family nucleotide pyrophosphatase -
  DKG76_RS14750 (DKG76_14750) - 2950552..2951550 (-) 999 WP_003237580.1 SPOR domain-containing protein -
  DKG76_RS14755 (DKG76_14755) comC 2951684..2952430 (-) 747 WP_003237582.1 A24 family peptidase Machinery gene
  DKG76_RS14760 (DKG76_14760) - 2952572..2953864 (-) 1293 WP_003237583.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  DKG76_RS14765 (DKG76_14765) valS 2953924..2956566 (-) 2643 WP_003237584.1 valine--tRNA ligase -
  DKG76_RS14770 (DKG76_14770) - 2957014..2957205 (+) 192 WP_003222590.1 hypothetical protein -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 26394.05 Da        Isoelectric Point: 9.6311

>NTDB_id=292752 DKG76_RS14755 WP_003237582.1 2951684..2952430(-) (comC) [Bacillus inaquosorum strain KCTC 13429]
MLPILFILGLILGSFYYTAGCRIPLHISIITPRSACSFCRRTLTPAELIPILSFLFQIGKCKSCGHRISFMYPVAELVTA
CLFAAAGIRFGPSPELFPALVFISLLIIVAVTDIHFMLIPNRILIFFVPVLAAARLISPLDSWYAGLLGAAAGFLFLALI
AAITHGGIGGGDIKLFAVIGFVLGVKMMAAAFFFSVLIGALYGAAAVLTGRLAKRQPLPFAPAIAAGSILAYLYGDSIIS
FYIKMALG

Nucleotide


Download         Length: 747 bp        

>NTDB_id=292752 DKG76_RS14755 WP_003237582.1 2951684..2952430(-) (comC) [Bacillus inaquosorum strain KCTC 13429]
ATGCTTCCCATTCTCTTTATCCTCGGGCTTATCCTTGGTTCATTTTATTATACGGCCGGGTGCCGTATCCCCTTACATAT
ATCCATTATCACGCCCCGTTCGGCATGCTCGTTTTGCCGGCGGACATTAACCCCGGCAGAATTAATCCCCATCCTGTCAT
TCCTTTTCCAAATAGGCAAATGTAAAAGCTGCGGGCACAGAATTTCTTTTATGTATCCTGTGGCAGAGCTTGTGACAGCG
TGTTTATTTGCGGCAGCAGGAATACGCTTTGGCCCGTCTCCGGAACTGTTTCCCGCTCTCGTGTTTATCTCTCTTCTCAT
CATCGTTGCAGTGACAGATATTCATTTTATGCTGATACCAAATCGGATATTAATTTTCTTTGTTCCCGTTCTGGCCGCTG
CAAGATTGATTTCTCCGCTTGATTCCTGGTATGCCGGCCTGTTAGGTGCGGCCGCCGGATTTCTATTCCTGGCCTTAATT
GCCGCAATCACCCATGGGGGAATAGGGGGAGGAGATATTAAATTATTTGCGGTGATTGGCTTTGTACTTGGTGTGAAAAT
GATGGCAGCTGCCTTTTTCTTTTCTGTTTTGATAGGTGCATTGTATGGAGCGGCAGCTGTCCTGACTGGAAGACTCGCCA
AAAGACAGCCGCTTCCCTTTGCCCCCGCAATTGCTGCAGGGAGCATTTTAGCTTATTTATACGGTGACTCTATCATTTCT
TTTTATATCAAAATGGCATTGGGCTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(7-90)

Type IV leader peptidase family (Peptidase_A24)

(100-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

93.548

100

0.935

Multiple sequence alignment