Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | DKG76_RS10875 | Genome accession | NZ_CP029465 |
| Coordinates | 2273028..2274158 (+) | Length | 376 a.a. |
| NCBI ID | WP_003241749.1 | Uniprot ID | A0A9W5LF35 |
| Organism | Bacillus inaquosorum strain KCTC 13429 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2268028..2279158
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DKG76_RS22110 | - | 2268273..2269787 (-) | 1515 | WP_003241759.1 | hypothetical protein | - |
| DKG76_RS10860 (DKG76_10860) | - | 2269870..2270748 (-) | 879 | WP_003241757.1 | tyrosine-type recombinase/integrase | - |
| DKG76_RS10865 (DKG76_10865) | - | 2270923..2271666 (+) | 744 | WP_003241756.1 | GIY-YIG nuclease family protein | - |
| DKG76_RS10870 (DKG76_10870) | - | 2272756..2272896 (+) | 141 | WP_003241752.1 | phage holin | - |
| DKG76_RS10875 (DKG76_10875) | rapC | 2273028..2274158 (+) | 1131 | WP_003241749.1 | tetratricopeptide repeat protein | Regulator |
| DKG76_RS21915 | - | 2274148..2274291 (+) | 144 | WP_162532064.1 | hypothetical protein | - |
| DKG76_RS10880 (DKG76_10880) | - | 2274612..2275079 (-) | 468 | WP_003241747.1 | hypothetical protein | - |
| DKG76_RS10885 (DKG76_10885) | - | 2275081..2275656 (-) | 576 | WP_003241745.1 | hypothetical protein | - |
| DKG76_RS10890 (DKG76_10890) | - | 2275877..2277127 (-) | 1251 | WP_003241743.1 | lesion bypass phage DNA polymerase | - |
| DKG76_RS10895 (DKG76_10895) | - | 2277120..2277452 (-) | 333 | WP_003241741.1 | YolD-like family protein | - |
| DKG76_RS10900 (DKG76_10900) | - | 2277626..2277961 (+) | 336 | WP_003241738.1 | hypothetical protein | - |
| DKG76_RS10905 (DKG76_10905) | - | 2278000..2278359 (-) | 360 | WP_032732301.1 | hypothetical protein | - |
| DKG76_RS10910 (DKG76_10910) | - | 2278365..2278832 (-) | 468 | WP_003241736.1 | DUF4879 domain-containing protein | - |
| DKG76_RS21920 | - | 2279072..2279152 (+) | 81 | WP_127721184.1 | putative holin-like toxin | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 44220.08 Da Isoelectric Point: 6.2537
>NTDB_id=292731 DKG76_RS10875 WP_003241749.1 2273028..2274158(+) (rapC) [Bacillus inaquosorum strain KCTC 13429]
MEQLIPSSTVGVKINEWYKYIRMFAVPDAEILKAEVEEEIKHMKEDQDLLLYYSLMCFRHQLMLDYLEPKSLNEERPKIS
DLLEKIESSQTKLKGVLEYYCNFFRGMYEFDKKDYIKAIRSYKIAEKKLALVTDEIERAEFYFKMAEVYYHMKQTHVSMH
YAEAALNIYKGQKTYTVRRIQCAFVVAGNFDDLESHEKAIPHLQKALKDSKAINKHKLIGASLYNLGNCYYKMKEYGKAA
EYIEQAVSLYENDKSDLLPHTLFTLTQIYFKMKDIEKAFILYKKGIEKAQAINDDVLVAEFNYLKALYIDSIDKRTVFRT
FSVLKDNVMYPDLEELALDTANYCKEIGQFENSTTFFAVMVDARIQIQRGECLYEI
MEQLIPSSTVGVKINEWYKYIRMFAVPDAEILKAEVEEEIKHMKEDQDLLLYYSLMCFRHQLMLDYLEPKSLNEERPKIS
DLLEKIESSQTKLKGVLEYYCNFFRGMYEFDKKDYIKAIRSYKIAEKKLALVTDEIERAEFYFKMAEVYYHMKQTHVSMH
YAEAALNIYKGQKTYTVRRIQCAFVVAGNFDDLESHEKAIPHLQKALKDSKAINKHKLIGASLYNLGNCYYKMKEYGKAA
EYIEQAVSLYENDKSDLLPHTLFTLTQIYFKMKDIEKAFILYKKGIEKAQAINDDVLVAEFNYLKALYIDSIDKRTVFRT
FSVLKDNVMYPDLEELALDTANYCKEIGQFENSTTFFAVMVDARIQIQRGECLYEI
Nucleotide
Download Length: 1131 bp
>NTDB_id=292731 DKG76_RS10875 WP_003241749.1 2273028..2274158(+) (rapC) [Bacillus inaquosorum strain KCTC 13429]
ATGGAGCAATTAATTCCGTCATCCACAGTTGGAGTTAAAATCAATGAGTGGTATAAATACATACGGATGTTCGCCGTTCC
AGATGCAGAGATATTAAAAGCAGAGGTTGAAGAAGAAATAAAACATATGAAGGAAGATCAAGACTTATTGCTGTATTATT
CTCTAATGTGTTTTCGTCATCAGCTAATGCTGGATTACCTTGAACCTAAGTCATTGAATGAAGAACGTCCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGCAGTCAAACAAAGCTTAAAGGTGTCCTGGAATATTACTGCAATTTCTTTAGAGGAAT
GTACGAATTTGATAAGAAGGATTATATAAAAGCAATAAGGTCATATAAAATTGCTGAGAAAAAGCTCGCTTTAGTAACAG
ACGAAATTGAACGAGCTGAGTTTTATTTCAAAATGGCTGAAGTGTATTATCACATGAAACAAACCCATGTATCAATGCAC
TATGCAGAAGCAGCCCTTAACATTTATAAAGGCCAAAAAACTTATACTGTTCGTAGAATTCAATGTGCATTTGTTGTAGC
AGGGAACTTCGATGATTTGGAAAGTCATGAAAAAGCTATTCCACACCTTCAGAAAGCTTTGAAAGATTCGAAAGCTATAA
ACAAGCACAAACTAATAGGGGCATCATTATATAATTTGGGAAACTGTTATTATAAGATGAAAGAGTATGGCAAAGCTGCT
GAATATATTGAACAAGCAGTCTCATTGTACGAAAACGATAAAAGTGATCTTCTCCCTCATACATTATTTACACTGACACA
AATTTACTTCAAAATGAAGGATATTGAAAAAGCCTTTATTCTTTATAAAAAAGGAATCGAGAAAGCACAAGCCATAAACG
ATGATGTCTTAGTTGCTGAGTTTAATTACTTAAAGGCTTTATATATCGACTCTATAGATAAACGCACAGTTTTTCGAACT
TTTTCTGTACTAAAAGATAATGTTATGTATCCAGATTTAGAGGAATTAGCACTCGACACGGCTAATTATTGTAAGGAGAT
AGGGCAATTTGAAAACTCAACCACCTTTTTTGCCGTTATGGTGGATGCCCGAATCCAAATACAAAGAGGAGAGTGTTTAT
ATGAAATTTAA
ATGGAGCAATTAATTCCGTCATCCACAGTTGGAGTTAAAATCAATGAGTGGTATAAATACATACGGATGTTCGCCGTTCC
AGATGCAGAGATATTAAAAGCAGAGGTTGAAGAAGAAATAAAACATATGAAGGAAGATCAAGACTTATTGCTGTATTATT
CTCTAATGTGTTTTCGTCATCAGCTAATGCTGGATTACCTTGAACCTAAGTCATTGAATGAAGAACGTCCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGCAGTCAAACAAAGCTTAAAGGTGTCCTGGAATATTACTGCAATTTCTTTAGAGGAAT
GTACGAATTTGATAAGAAGGATTATATAAAAGCAATAAGGTCATATAAAATTGCTGAGAAAAAGCTCGCTTTAGTAACAG
ACGAAATTGAACGAGCTGAGTTTTATTTCAAAATGGCTGAAGTGTATTATCACATGAAACAAACCCATGTATCAATGCAC
TATGCAGAAGCAGCCCTTAACATTTATAAAGGCCAAAAAACTTATACTGTTCGTAGAATTCAATGTGCATTTGTTGTAGC
AGGGAACTTCGATGATTTGGAAAGTCATGAAAAAGCTATTCCACACCTTCAGAAAGCTTTGAAAGATTCGAAAGCTATAA
ACAAGCACAAACTAATAGGGGCATCATTATATAATTTGGGAAACTGTTATTATAAGATGAAAGAGTATGGCAAAGCTGCT
GAATATATTGAACAAGCAGTCTCATTGTACGAAAACGATAAAAGTGATCTTCTCCCTCATACATTATTTACACTGACACA
AATTTACTTCAAAATGAAGGATATTGAAAAAGCCTTTATTCTTTATAAAAAAGGAATCGAGAAAGCACAAGCCATAAACG
ATGATGTCTTAGTTGCTGAGTTTAATTACTTAAAGGCTTTATATATCGACTCTATAGATAAACGCACAGTTTTTCGAACT
TTTTCTGTACTAAAAGATAATGTTATGTATCCAGATTTAGAGGAATTAGCACTCGACACGGCTAATTATTGTAAGGAGAT
AGGGCAATTTGAAAACTCAACCACCTTTTTTGCCGTTATGGTGGATGCCCGAATCCAAATACAAAGAGGAGAGTGTTTAT
ATGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
50.798 |
100 |
0.508 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
45.646 |
100 |
0.46 |