Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   DKG76_RS07955 Genome accession   NZ_CP029465
Coordinates   1551989..1552573 (+) Length   194 a.a.
NCBI ID   WP_003238902.1    Uniprot ID   A0A9Q4HW25
Organism   Bacillus inaquosorum strain KCTC 13429     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1546989..1557573
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DKG76_RS07925 (DKG76_07925) dapD 1547170..1547880 (+) 711 WP_003238912.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  DKG76_RS07930 (DKG76_07930) - 1547950..1549074 (+) 1125 WP_003238911.1 N-acetyldiaminopimelate deacetylase -
  DKG76_RS07935 (DKG76_07935) - 1549135..1549380 (+) 246 WP_003238909.1 YkuS family protein -
  DKG76_RS07940 (DKG76_07940) mscT 1549418..1550221 (-) 804 WP_003238907.1 small-conductance mechanosensitive channel protein MscT -
  DKG76_RS07945 (DKG76_07945) ahpA 1550466..1551008 (+) 543 WP_003238905.1 biofilm-specific peroxidase AhpA -
  DKG76_RS07950 (DKG76_07950) - 1551078..1551536 (+) 459 WP_003238903.1 TlpA disulfide reductase family protein -
  DKG76_RS07955 (DKG76_07955) rok 1551989..1552573 (+) 585 WP_003238902.1 transcriptional regulator Rok Regulator
  DKG76_RS07960 (DKG76_07960) - 1552615..1553580 (-) 966 WP_032732099.1 hypothetical protein -
  DKG76_RS07965 (DKG76_07965) - 1553716..1554315 (+) 600 WP_003238898.1 molybdenum cofactor guanylyltransferase -
  DKG76_RS07970 (DKG76_07970) - 1554366..1555385 (+) 1020 WP_003238897.1 molybdopterin-synthase adenylyltransferase MoeB -
  DKG76_RS07975 (DKG76_07975) glp 1555403..1556695 (+) 1293 WP_003238895.1 gephyrin-like molybdotransferase Glp -
  DKG76_RS07980 (DKG76_07980) mobB 1556656..1557177 (+) 522 WP_003238894.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22145.10 Da        Isoelectric Point: 9.7169

>NTDB_id=292725 DKG76_RS07955 WP_003238902.1 1551989..1552573(+) (rok) [Bacillus inaquosorum strain KCTC 13429]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEVKKDFRSERKTDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=292725 DKG76_RS07955 WP_003238902.1 1551989..1552573(+) (rok) [Bacillus inaquosorum strain KCTC 13429]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTACGATTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATCGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAGTCAAAAAGGATTTCC
GTTCTGAACGAAAAACTGACTCTCTGCCGGTTCTTGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAACAGCAGTCTGTACAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCTGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCGAAAGCAGCTAAGCTGCGTGAAGCTGCCATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAAGGTGAAATCGAATCAGCTGA
ATCTGCAGAATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

98.413

97.423

0.959

Multiple sequence alignment